Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq64 120 2e-22 seq277 107 1e-18 >seq64 Length=29840 Score = 120 bits (132), Expect = 2e-22 Identities = 157/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| ||||| | | ||| ||||| || | ||| ||| ||||| ||||| ||||| | Sbjct 4666 CGCCACCTCTCAATCTCAAAACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAATCCG 4725 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 || |||| | ||||||| | ||||||||||||||| || || ||||| |||||||||| Sbjct 4726 CGAGAGTTCTCCCGTCTTCTAATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCGGCG 4785 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | |||||||||||| ||| ||| | ||| ||| | || ||||| ||| Sbjct 4786 GGATGCCCTCCTTGTCT-TGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAAGACTCG 4844 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTT 34691 ||||| | || || ||||| || || || ||||| Sbjct 4845 ACTTCGAGAGTGATGGTTTTCCCCGTCAAAGTTTT 4879 >seq277 Length=9178 Score = 107 bits (118), Expect = 1e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535 || |||||||| | ||||| ||| || || || || |||||||| ||||| ||||| Sbjct 8062 GTGGCCGCCTCGCAAACGCAGCACTAAGTGCAGCGTCGATTCCTTTTGGATGTTGTAATC 8121 Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 | | |||||| ||||||| | ||| || ||||| ||||| || |||||||||||||| Sbjct 8122 CGCCAACGTTCGCCCGTCTTCCAATTGCTTCCCGGCGAATATCAACCGCTGTTGGTCCGG 8181 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCT 34654 || | || || |||||| |||| || | || ||| || || || || || Sbjct 8182 GGGGATCCCTTCTTTGTCTTGGATC-TTCGCCTTGACGTTATCGATCGTATCGGAAGACT 8240 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGT 34682 |||| |||| ||||||||||| || || Sbjct 8241 CCACCTCCAACGTTATCGTTTTGCCAGT 8268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314721475845494