Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq64 96.9 2e-15 seq277 91.5 1e-13 >seq64 Length=29840 Score = 96.9 bits (106), Expect = 2e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || || | ||| ||| ||||| || || ||||||||||| |||||||| || Sbjct 4801 GACAAGGAGGGCATCCCGCCGGACCAGCAGCGATTGATTTTTGCCGGTAAACAATTAGAA 4742 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| | | | | ||||||||||||||||||||| ||| ||||| ||||||||| Sbjct 4741 GACGGGAGAACTCTCGCGGATTACAACATCCAAAAAGAGTCCACGTTGCACTTGGTTTTG 4682 Query 28003 CGTTTGCGTGGCGGCG 28018 | ||| | || |||| Sbjct 4681 AGATTGAGAGGTGGCG 4666 >seq277 Length=9178 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||||||||| | || ||| || || ||||| || || ||||| || |||||||| Sbjct 8199 GACAAAGAAGGGATCCCCCCGGACCAACAGCGGTTGATATTCGCCGGGAAGCAATTGGAA 8140 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| || | ||| | ||||||||||||||||| || || |||| || || || Sbjct 8139 GACGGGCGAACGTTGGCGGATTACAACATCCAAAAGGAATCGACGCTGCACTTAGTGCTG 8080 Query 28003 CGTTTGCGTGGCGGCGAC 28020 |||||||| |||||| || Sbjct 8079 CGTTTGCGAGGCGGCCAC 8062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355853214079386