Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq64 123 6e-23 seq277 100 7e-16 >seq64 Length=29840 Score = 123 bits (136), Expect = 6e-23 Identities = 139/185 (75%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 |||||||||||||||||||| |||||||| || || || || ||||| | || || || Sbjct 4698 GTGGACTCTTTTTGGATGTTGTAATCCGCGAGAGTTCTCCCGTCTTCTAATTGTTTACCG 4757 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || || | || || ||||| || || | || |||||||| || || || |||| Sbjct 4758 GCAAAAATCAATCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGAATTTTCGCTTTC 4817 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||| ||||| || || || ||||||||||| || || ||||| | ||| Sbjct 4818 ACGTTGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATGGTTTTCCCCGTCAAAGT- 4876 Query 211098 TTTAC 211102 ||||| Sbjct 4877 TTTAC 4881 >seq277 Length=9178 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || || || ||||||||||| |||||||| | || | || ||| Sbjct 8081 AGCACTAAGTGCAGCGTCGATTCCTTTTGGATGTTGTAATCCGCCAACGTTCGCCCGTCT 8140 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||| || ||||| || | || |||||||| || || | ||||| ||||| Sbjct 8141 TCCAATTGCTTCCCGGCGAATATCAACCGCTGTTGGTCCGGGGGGATCCCTTCTTTGTCT 8200 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| || || || || ||||| | || ||||| Sbjct 8201 TGGATCTTCGCCTTGACGTTATCGATCGTATCGGAAGACTCCACCTCCAACGTTATCGTT 8260 Query 211083 TTTCCCGT 211090 || || || Sbjct 8261 TTGCCAGT 8268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159120544237070