Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq64 93.3 4e-14 >seq64 Length=29840 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 ||| ||||| || | || ||||| || | |||| ||||||||| || || ||||| || Sbjct 4667 GCCACCTCTCAATCTCAAAACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAATCCGC 4726 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGG 39176 || |||| |||| || | ||||| || ||||| || | ||||||||||| | || Sbjct 4727 GAGAGTTCTCCCGTCTTCTAATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCGGCGG 4786 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCA 39235 | || ||| ||||| |||||| ||| | ||| | | | ||| || ||||| | Sbjct 4787 GATGCCCTCCTTGTCTTGAATTTTCGCTTTCA-CGTTGTCGATCGTGTCCGAAGACTCGA 4845 Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270 | || | ||||| |||| ||||||| |||||| Sbjct 4846 CTTCGAGAGTGATGGTTTTCCCCGTCAAAGTTTTA 4880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429534512085734