Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq64 141 6e-29 seq277 93.3 3e-14 >seq64 Length=29840 Score = 141 bits (156), Expect = 6e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23625 TAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGAAAT 23684 |||||| | ||||| ||||| |||||||||||||| || || ||||||| | || | Sbjct 4880 TAAAACTTTGACGGGGAAAACCATCACTCTCGAAGTCGAGTCTTCGGACACGATCGACAA 4821 Query 23685 ATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATT 23744 | ||| |||||| ||||| || || | ||||| || || ||||| || || || Sbjct 4820 CGTGAAAGCGAAAATTCAAGACAAGGAGGGCATCCCGCCGGACCAGCAGCGATTGATTTT 4761 Query 23745 TGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTC 23804 |||||| |||||| | ||||||| | ||| | | ||||||||||| ||||||||||| Sbjct 4760 TGCCGGTAAACAATTAGAAGACGGGAGAACTCTCGCGGATTACAACATCCAAAAAGAGTC 4701 Query 23805 CACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || ||||| || ||| |||| || Sbjct 4700 CACGTTGCACTTGGTTTTGAGATTGAGAGGTGG 4668 >seq277 Length=9178 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 ||||||||||| | || || || |||||||| || ||||| ||||| || ||| ||||| Sbjct 8199 GACAAAGAAGGGATCCCCCCGGACCAACAGCGGTTGATATTCGCCGGGAAGCAATTGGAA 8140 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 |||| || || || | ||||||||||| ||||| || || || | || ||||| | Sbjct 8139 GACGGGCGAACGTTGGCGGATTACAACATCCAAAAGGAATCGACGCTGCACTTAGTGCTG 8080 Query 23824 AGGTTGCGAGGAGG 23837 | |||||||| || Sbjct 8079 CGTTTGCGAGGCGG 8066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338000874915944