Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq11 176 6e-39 >seq11 Length=57886 Score = 176 bits (194), Expect = 6e-39 Identities = 480/730 (66%), Gaps = 4/730 (1%) Strand=Plus/Plus Query 77898 TCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCA 77957 |||||||| || | || || || ||| ||||| || ||||| || ||| || Sbjct 11904 TCTCTTTCGTACTTGGTGTACAGAGCTTCGAATTCTTCACCCCAGCATTCGGACAAACCC 11963 Query 77958 GGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAG 78017 ||||| || || |||||||||| || ||| | || | ||| | |||| |||||| || Sbjct 11964 GGGCACTCGTTCGGGCACATCAGTGTCCACTTGCCGTTTTCTTCGACTCTTTTCATGAAC 12023 Query 78018 AGATCAGGTATCCATAGAGCAATAAATAGA-TCTCGGGTTCTATGTTCTTCATTTCCTGT 78076 | ||| |||| | ||| |||| | || || | |||| |||||| || || Sbjct 12024 AAATCGTTCGTCCACA-AGCCGTAAAACAAGTCACGAGCTCTAGCTTCTTCCTTGCCGTG 12082 Query 78077 ATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGC 78136 |||||| | | |||||| | || | || || || ||||||||||| ||||| || || Sbjct 12083 GTTCTTTCTCAAATCGAGCCAGTCGAAGATGTCCGAGTGCCATGGTTCGAGATAGATGGC 12142 Query 78137 CATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAAC 78196 | | | || || ||| || || || || | ||| || || |||| || | || Sbjct 12143 AAAAGCGCCCTTGCGCTTACCGCCGCCTTGGTCCACATACCTCGCTGTGTCGTTGAACAC 12202 Query 78197 TCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACT 78256 | | ||| |||||||||||||| || || || ||||| || ||||| | || Sbjct 12203 CCGAAGCATCGGAATAATACCGTTCGAAGTACCGTTTGTGCCTCTGATATA-CGAAGACG 12261 Query 78257 TG-CGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGC 78315 || | || || | |||||| | || || || || || ||| || || |||| Sbjct 12262 TGGCACGGATGTCGTGAATGGACAAACCGATACCACCGGCGGACTTGGAAATGCACGCGC 12321 Query 78316 AACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAAC 78375 | ||||| || ||||||||||| || || ||| ||| ||||| || | ||| | Sbjct 12322 ACTCCTTCAACGTGTCGTAGATACCTTCAATGGAGTCTTCCTTCATGCAAATCAAAAAGC 12381 Query 78376 AGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAA 78435 | || | || | || || || || || || || || || || |||||||| | Sbjct 12382 ACGAGGAGAGCTGCGGTCGAGGTGTACCAGCGTTGAACAAGGTTGGCGACGCATGCGTCA 12441 Query 78436 ACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAA 78495 ||| ||||| | | | ||| ||||||||||| ||| || ||| | || | Sbjct 12442 TCCAACGCTCAGACAACATGTGGTAGGTTTCAATAGCCTTTTCGATATCCTTCTTGTGGA 12501 Query 78496 TTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTT 78555 | || | | ||| | ||||||||| ||||| || | || || |||| | ||| Sbjct 12502 TACCGATGGATACTCTCATCAACATGTGCTGTGGACGCTCGACAACCTTACCGTCTATGC 12561 Query 78556 TCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCT 78615 |||||||||||| |||||||||||| |||||||| |||| || |||||| | | Sbjct 12562 GCAACAAGTATGAGCGTTCCAAAGTTTTGAAACCAAAGTAGTCATAATCAAAGTCACGGT 12621 Query 78616 CGTAAATAAT 78625 |||| | ||| Sbjct 12622 CGTAGACAAT 12631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694650408643520