Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq11 161 1e-34 >seq11 Length=57886 Score = 161 bits (178), Expect = 1e-34 Identities = 481/735 (65%), Gaps = 8/735 (1%) Strand=Plus/Plus Query 76490 TTCTCTCTTTCATATT--GTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCA 76547 || |||||||| || | ||||| | | | ||| ||||| || ||||| || || Sbjct 11901 TTTTCTCTTTCGTACTTGGTGTACAGAGC--TTCGAATTCTTCACCCCAGCATTCGGACA 11958 Query 76548 AACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCA 76607 |||| || || || ||||| ||||||| || ||||| || | ||| | || | ||||| Sbjct 11959 AACCCGGGCACTCGTTCGGGCACATCAGTGTCCACTTGCCGTTTTCTTCGACTCTTTTCA 12018 Query 76608 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGA-TCTCGGGTTCTACGTTCTTCATTT 76666 | || | ||| |||| | ||| |||| | || || | |||| |||||| || Sbjct 12019 TGAACAAATCGTTCGTCCACA-AGCCGTAAAACAAGTCACGAGCTCTAGCTTCTTCCTTG 12077 Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726 || |||||| | | ||| || | || | || || || ||||||||||| ||||| Sbjct 12078 CCGTGGTTCTTTCTCAAATCGAGCCAGTCGAAGATGTCCGAGTGCCATGGTTCGAGATAG 12137 Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786 || || | | | ||| || ||| || || || || | ||| || || |||| || Sbjct 12138 ATGGCAAAAGCGCCCTTGCGCTTACCGCCGCCTTGGTCCACATACCTCGCTGTGTCGTTG 12197 Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846 | || | | ||| |||||||| ||||| || ||||| ||||| || |||| || Sbjct 12198 AACACCCGAAGCATCGGAATAATACCGTTCGAAGTACCGTTTGTGCCTCTGATAT-ACGA 12256 Query 76847 CCACAT-GCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAG 76905 || | ||||| || | ||| || | || || || || || || || || Sbjct 12257 AGACGTGGCACGGATGTCGTGAATGGACAAACCGATACCACCGGCGGACTTGGAAATGCA 12316 Query 76906 AGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAG 76965 || || ||||| ||||| ||||| || || || || ||| ||||| || | Sbjct 12317 CGCGCACTCCTTCAACGTGTCGTAGATACCTTCAATGGAGTCTTCCTTCATGCAAATCAA 12376 Query 76966 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATG 77025 ||| || || | || | || || || || || ||||| || || || ||||| Sbjct 12377 AAAGCACGAGGAGAGCTGCGGTCGAGGTGTACCAGCGTTGAACAAGGTTGGCGACGCATG 12436 Query 77026 AGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTG 77085 || | ||| ||||| | | | ||| ||||||||| | ||| |||||| | Sbjct 12437 CGTCATCCAACGCTCAGACAACATGTGGTAGGTTTCAATAGCCTTTTCGATATCCTTCTT 12496 Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATT 77145 || || || | | || | ||||||||| ||||| || || || ||| |||| | Sbjct 12497 GTGGATACCGATGGATACTCTCATCAACATGTGCTGTGGACGCTCGACAACCTTACCGTC 12556 Query 77146 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 77205 ||| |||||||||||| |||||||||||| |||||||| |||| || |||||| Sbjct 12557 TATGCGCAACAAGTATGAGCGTTCCAAAGTTTTGAAACCAAAGTAGTCATAATCAAAGTC 12616 Query 77206 TCTTTCGTAAATAAT 77220 | ||||| | ||| Sbjct 12617 ACGGTCGTAGACAAT 12631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712915525061760