Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq64 134 3e-26 seq277 89.7 1e-12 >seq64 Length=29840 Score = 134 bits (148), Expect = 3e-26 Identities = 139/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || ||||||||||||||||||||||| || | ||||||||| ||||||| ||| ||| Sbjct 4698 GTGGACTCTTTTTGGATGTTGTAATCCGCGAGAGTTCTCCCGTCTTCTAATTGTTTACCG 4757 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || || || | | ||||||||||| || ||| || ||||| ||||||||||| ||| Sbjct 4758 GCAAAAATCAATCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGAATTTTCGCTTTC 4817 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | |||| ||| ||| ||||| ||||| || ||||| ||||| | ||| Sbjct 4818 ACGTTGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATGGTTTTCCCCGTCAAAGTT 4877 Query 152088 TT 152089 || Sbjct 4878 TT 4879 >seq277 Length=9178 Score = 89.7 bits (98), Expect = 1e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || || || || || ||||||||||||||||| || || |||| ||| ||||| | Sbjct 8090 TGCAGCGTCGATTCCTTTTGGATGTTGTAATCCGCCAACGTTCGCCCGTCTTCCAATTGC 8149 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 ||||||||||| || | || ||| ||||||| | ||| ||||| || ||||| || || Sbjct 8150 TTCCCGGCGAATATCAACCGCTGTTGGTCCGGGGGGATCCCTTCTTTGTCTTGGATCTTC 8209 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||||| | || | | || ||| ||| || || | || || |||||||| || Sbjct 8210 GCCTTGACGTTATCGATCGTATCGGAAGACTCCACCTCCAACGTTATCGTTTTGCCAGT 8268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153789488909178