Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq64 176 9e-39 seq51 134 3e-26 seq277 118 2e-21 >seq64 Length=29840 Score = 176 bits (194), Expect = 9e-39 Identities = 156/195 (80%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| || |||||| ||||||||||||||||| || || || || | || || ||| Sbjct 4686 ACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAATCCGCGAGAGTTCTCCCGTCTTCT 4745 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| |||||||| ||||| || || ||||| ||| || |||||||||||||| Sbjct 4746 AATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGA 4805 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || || ||||| ||| | ||||| |||||||||| ||||||||||||||||| || || Sbjct 4806 ATTTTCGCTTTCACGTTGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATGGTTTTC 4865 Query 283071 CCCGTCAAAGTCTTA 283085 ||||||||||| ||| Sbjct 4866 CCCGTCAAAGTTTTA 4880 >seq51 Length=33875 Score = 134 bits (148), Expect = 3e-26 Identities = 355/535 (66%), Gaps = 8/535 (1%) Strand=Plus/Minus Query 273585 ATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCAATACCGGAA 273644 |||| |||| | | ||||| | |||| || ||||| || || || ||||| Sbjct 7248 ATAACATCTCTCGCATTGTAGTTTGGAATCGAAGTGGACCATCCCGTCCCGATACCTTCG 7189 Query 273645 GAACCATTCACCAGAATACTCGGGATAATTGGGACATAATATTCGGGCTCAATTTTATCA 273704 | || || | || || | | || |||| || | ||||| | || ||||| || | | Sbjct 7188 GCGCCGTTAATCAAAACAGTTGGAATAACCGGCATGTAATACGCCGGTTCAATCTTCTGA 7129 Query 273705 CCATCGTCGTAAAGGTACTTCAACAAAGCATCATCCGTATCAACGAAAACCTTTCGCGTC 273764 ||||| || | ||| ||||||||||| || || ||| ||| || || ||| Sbjct 7128 CCATCTTCATCGTTGTATTTCAACAAAGCGTCGTCGCATTCAGGGAATACAACTCTGGTC 7069 Query 273765 TGAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGC 273824 | || ||| |||||||| | | |||||||||||| || ||||||| Sbjct 7068 AACTGCGCCAAACGCGTAAAAATGTAACGCGGCGACGCATGGTCCTTCCCGCCTTGCAAA 7009 Query 273825 CTCGAACCAAACTGACC-CTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATC 273883 | || |||||| ||||| |||||| | || | ||||||||||||| | || ||| | || Sbjct 7008 CGCGTACCAAATTGACCGCTCGGG-ACTAACAAGTTTATGTTGTTCGTCCCAACGAAGTC 6950 Query 273884 CTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTG 273943 || || | ||| || || || | || || | || |||||||||||||| || Sbjct 6949 TTGCGCGAGATTGACAATTGTGGACGCGAGAGACGCTTCACCGTGGTGATAGGCTGAATG 6890 Query 273944 TTCGGCGATATAACCACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGAA 274003 ||| | || ||||| || || || ||||| || | || | | || |||| |||||| Sbjct 6889 TTCCGAGACGTAACCGCTCAATTGCGCAACTTTGATGTCTGACTTTAACTTTCTCTTGAA 6830 Query 274004 TGCGGAATACAACACCTTCCGCTGCGAGGGCTTGAACCCATCAACGACCGATGGAAT--A 274061 ||| ||| || || || ||||| || ||||| ||||| | | | |||||||| | Sbjct 6829 GCACGAAAACATAACTTTTCGTTGCGAAGGTTTGAAGCCATCGATGGCGGATGGAATCGA 6770 Query 274062 CTGCGTTCCAAATCATACCGA-GAGAACAAAATCAGTTCCTTGTCAATGAAGTCA 274115 || || ||||| | || | ||||| | |||| ||| || | ||||| ||| Sbjct 6769 ACGCATT--AAATC-TGCCAAGGAGAAAAGGATCAATTCTTTATTGATGAATTCA 6718 >seq277 Length=9178 Score = 118 bits (130), Expect = 2e-21 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| |||||||||||||| || || | ||| || || || || | ||| |||||||| || Sbjct 8101 TTCCTTTTGGATGTTGTAATCCGCCAACGTTCGCCCGTCTTCCAATTGCTTCCCGGCGAA 8160 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| || |||||||| || || || || |||||||||||||| || || ||| | Sbjct 8161 TATCAACCGCTGTTGGTCCGGGGGGATCCCTTCTTTGTCTTGGATCTTCGCCTTGACGTT 8220 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCA 283077 |||||| || || |||| || || || | || ||||| || || |||| Sbjct 8221 ATCGATCGTATCGGAAGACTCCACCTCCAACGTTATCGTTTTGCCAGTCA 8270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046710794769172