Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq64 149 2e-30 seq277 116 9e-21 >seq64 Length=29840 Score = 149 bits (164), Expect = 2e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177936 AAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAAC 177995 |||||| | || || ||||| ||||| ||||| || || || ||||| ||||| ||| Sbjct 4879 AAAACTTTGACGGGGAAAACCATCACTCTCGAAGTCGAGTCTTCGGACACGATCGACAAC 4820 Query 177996 GTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTC 178055 || ||| || ||||| ||||| || || ||||| ||||||||||| ||| | || || Sbjct 4819 GTGAAAGCGAAAATTCAAGACAAGGAGGGCATCCCGCCGGACCAGCAGCGATTGATTTTT 4760 Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCA 178115 ||||| ||||| | ||||| || || ||||| || ||||| ||| |||||||||| || Sbjct 4759 GCCGGTAAACAATTAGAAGACGGGAGAACTCTCGCGGATTACAACATCCAAAAAGAGTCC 4700 Query 178116 ACACTGCATCTTGTTTTGAGACTCAGA 178142 || |||| | ||||||||| | ||| Sbjct 4699 ACGTTGCACTTGGTTTTGAGATTGAGA 4673 >seq277 Length=9178 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || |||||||| || | |||||||| || || || ||||| |||||||| Sbjct 8268 ACTGGCAAAACGATAACGTTGGAGGTGGAGTCTTCCGATACGATCGATAACGTCAAGGCG 8209 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| || ||||||||||| ||||| |||||||| || || | || |||||||| || Sbjct 8208 AAGATCCAAGACAAAGAAGGGATCCCCCCGGACCAACAGCGGTTGATATTCGCCGGGAAG 8149 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123 || | ||||| || | || | || ||||| ||| ||||||| ||||| || ||||| Sbjct 8148 CAATTGGAAGACGGGCGAACGTTGGCGGATTACAACATCCAAAAGGAATCGACGCTGCA 8090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203698534496892