Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq277 96.9 3e-15 >seq277 Length=9178 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || | ||| | ||| | |||||||| ||||| || ||||| || || | Sbjct 8065 GCCGCCTCGCAAACGCAGCACTAAGTGCAGCGTCGATTCCTTTTGGATGTTGTAATCCGC 8124 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | || ||| |||| || | ||||| ||||||||||||| ||||||||||||| ||| Sbjct 8125 CAACGTTCGCCCGTCTTCCAATTGCTTCCCGGCGAATATCAACCGCTGTTGGTCCGGGGG 8184 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | || |||| | || | || || | ||| | | || ||| ||||||| Sbjct 8185 GATCCCTTCTTTGT-CTTGGATCTTCGCCTTGACGTTATCGATCGTATCGGAAGACTCCA 8243 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCA 41840 |||||| |||||||||||| || |||| Sbjct 8244 CCTCCAACGTTATCGTTTTGCCAGTCA 8270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462291760501600