Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq61 104 3e-17 >seq61 Length=579265 Score = 104 bits (114), Expect = 3e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 97203 CAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAAC 97262 ||||| || || |||| |||||||| || |||||||| || || ||||| |||| Sbjct 235703 CAGGTGGAAACCGGAAACCCGTACATGCTGTACAAGGACACATGCAACCGCAAGTCCAAC 235762 Query 97263 CAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCC 97322 || | || ||||||||||| ||||||| |||||||| ||||| || |||||| | Sbjct 235763 CAGCAGAACCTGGGCACCATCCGCTGCTCCAACCTGTGCACTGAAATAGTGGAGTACACG 235822 Query 97323 TCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATC 97357 ||| |||| |||||||| || ||| ||||| || Sbjct 235823 TCTGCGGAGGAGACGGCTGTGTGCAACCTGGCCTC 235857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741033716826760