Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq152 91.5 9e-14 >seq152 Length=376403 Score = 91.5 bits (100), Expect = 9e-14 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200 |||| |||| | || | ||||||||||| ||| ||||| ||||| || || || |||| Sbjct 329359 CACCACCTCGAAGGCGGAGCACCAAATGCAGTGTGGACTCCTTTTGGATGTTATAGTCAG 329418 Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260 || | | || ||||| ||||||||| ||| || | ||| |||||||| | | Sbjct 329419 CCAGGGTCCGCCCATCCTCCAACTGCTTTCCAGCAAAGATAAGACGCTGCTGGTCAGGAG 329478 Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320 | || || || || || |||| | || || | | ||| ||||| | | | || Sbjct 329479 GGATACCCTCCTTATCTTGAATCTTCGCCTTGACATTGTCAATGGTGTCACTTGACTCAA 329538 Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 | || ||||| || ||||| || || | ||| || || || ||||||||| Sbjct 329539 CCTCAAGAGTAATGGTTTTCCCTGTCAAAGTCTTGACAAAGATTTGCATG 329588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318766912084398