Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq41 89.7 4e-13 >seq41 Length=668564 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | |||||| | || || || ||||| || ||||| || | || Sbjct 25084 ATGCAGATCTTTGTGAAAACACTGACTGGGAAGACCATCACTTTGGAAGTTGAGTCTTCA 25143 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | ||| || ||| || || |||||| | ||| | |||| Sbjct 25144 GATACAATTGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCTCCAGACCAG 25203 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || || |||||||| || ||||| || ||| | || | || ||||||||| Sbjct 25204 CAACGCCTCATTTTTGCTGGAAAGCAACTTGAGGATGGACGCACACTAGCGGATTACAAT 25263 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| || || || ||||| ||| | || | ||||| |||||||| Sbjct 25264 ATTCAAAAAGAGTCGACTCTGCATTTAGTCCTTCGTTTGCGAGGAGG 25310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358112792858854