Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq61 109 5e-19 >seq61 Length=579265 Score = 109 bits (120), Expect = 5e-19 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 94480 CAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAAC 94539 |||||||| || || | || ||||| ||| ||||||| | |||| |||||||||| Sbjct 235703 CAGGTGGAAACCGGAAACCCGTACATGCTGTACAAGGACACATGCAACCGCAAGTCCAAC 235762 Query 94540 CAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACT 94599 |||||| |||| || ||| |||| || |||||||| || || || ||||| || Sbjct 235763 CAGCAGAACCTGGGCACCATCCGCTGCTCCAACCTGTGCACTGAAATAGTGGAGTACACG 235822 Query 94600 TCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCAT 94637 ||| |||| |||| |||||||| ||||||| |||||| Sbjct 235823 TCTGCGGAGGAGACGGCTGTGTGCAACCTGGCCTCCAT 235860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494706187705960