Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq126 91.5 2e-13 seq61 89.7 8e-13 >seq126 Length=422855 Score = 91.5 bits (100), Expect = 2e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 159915 ACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACA 159974 |||| || || ||||| |||||||| || ||||||||||| || || ||||||||||| | Sbjct 387476 ACAGCAGACATGCAAAATCGCAGTGAAGGCCCTCGTCCCGCGATATCAACTCGTTGGAGA 387417 Query 159975 TGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAAT 160017 | |||| || |||||| |||||| || ||||||||||| Sbjct 387416 AGGTGAGACCATGCATGAGACCACGCTTCTTCAGCCAAAAAAT 387374 >seq61 Length=579265 Score = 89.7 bits (98), Expect = 8e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 203914 CTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAAT 203973 || ||| |||| | ||||| ||| | ||| |||| | ||||||||||| |||||| | Sbjct 238950 CTTCCAAGCGTAGAAGTGCAGGGACGTCAGCTTGCCGAAGTTGGGGTCGGACATGTGGAC 238891 Query 203974 GTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGG 204032 || | |||||||| ||||||||||| |||||| || || || ||||| | | | | Sbjct 238890 ATTGAAGGACTGGCTCTGGTCGATGAA-GGCGCCGCGGTCCGCCGCCATGTCCACCAGAG 238832 Query 204033 TCTTCTGCGAAATCTCCCACACCGTCTTGAACA 204065 | | ||| || ||||||||||||||| ||| Sbjct 238831 CCCTTTGCTTTATTTCCCACACCGTCTTGTACA 238799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795127856600560