Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq127 131 2e-25 seq183 93.3 5e-14 >seq127 Length=421896 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 ||||| ||||| ||||| || || ||||||| ||||| || ||||| || || ||| Sbjct 174506 TTTTCCACAGGGTCCATGCACTTCCGGAACAGATCCATGTTGAGCTCCTCGAATCGAGCA 174565 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 || || | | | ||||||||||| || ||||| || ||||| ||||| || || Sbjct 174566 CGTGTCAGTGTGGAATAGAAATCAATACCCTCGTACAAACTGTCAATCTCAATCGTCGTC 174625 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || || | ||| | || ||||| || |||||||| |||||||| | |||||||| Sbjct 174626 TGGGCAGAAGAACTGAGGGTGCGCTTGGCACGCTCACATGCCGTTCGGAGACGACGAACA 174685 Query 7382 GCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC 7428 ||||| || ||| | || || || ||||||| || ||||| ||||| Sbjct 174686 GCACGGGGATTAGCTGACATGTCCTTCTTATTCTTCCGTTTGAACTC 174732 >seq183 Length=335858 Score = 93.3 bits (102), Expect = 5e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 7228 GAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAAC 7287 |||||||||||| ||| |||||||| | || ||||| |||| | ||||| |||| Sbjct 250889 GAACAAGTCCATGTTCAGCTCCTCAAATCTGGCGCGGGTTATGGTCGAGTAGAAGTCAAT 250948 Query 7288 GCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTT 7347 || ||||| | || || || || ||| | || || || || ||||| | ||| ||||| Sbjct 250949 CCCCTCGTAGAGGGAGTCGATCTCGATGCTCGTCTGCGCTGTGGAAGAAAGCGTGCGCTT 251008 Query 7348 TGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTT 7407 || ||||| || | || | || || || || || ||||| || || ||| || || Sbjct 251009 GGCCCGCTCGCATGATGTCCTCAAGCGGCGGAGAGCTCGCGGATTGTCGCTAATGTCCTT 251068 Query 7408 CTTATGTTTACGTTTAAACTC 7428 ||| | || || || ||||| Sbjct 251069 CTTGTTCTTCCGCTTGAACTC 251089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635110959370840