Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq188 89.7 6e-13 >seq188 Length=330512 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/127 (76%), Gaps = 4/127 (3%) Strand=Plus/Plus Query 9279 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9338 || || ||||||||||| |||| | ||||| || || || ||||| |||||||| || Sbjct 30682 TCGAACCCATCCATCTCAGTCAGCAACTGGTTGATGGTCTGCTCCCGCTCATCATTGCCT 30741 Query 9339 GGCATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAA 9396 | | ||| ||||||| ||| || ||| || |||||||||||||||||||| |||| Sbjct 30742 --CCTCCCATGCCAGCACCGCGCTGACGTCCGACAGCATCAATCTCATCAATGAAAACAA 30799 Query 9397 TACATgg 9403 | || || Sbjct 30800 TGCAGGG 30806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589960512035240