Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq61 132 9e-26 >seq61 Length=579265 Score = 132 bits (146), Expect = 9e-26 Identities = 152/198 (77%), Gaps = 5/198 (3%) Strand=Plus/Minus Query 213461 CCCG-TCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT 213519 |||| ||| |||||| ||||| || ||| |||||||||||| || ||| ||||| Sbjct 235889 CCCGATCCCTCACAAAGCGGGGCAGTGCAATGGAGGCCAGGTTGCACACAGCCGTCTCCT 235830 Query 213520 GAG-AGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGG 213578 | || | |||||||||| || || |||||||||||| ||| ||||||||||||||| Sbjct 235829 CCGCAGAC-GTGTACTCCACTATTTCAGTGCACAGGTTGGAGCAGCGGATGGTGCCCAGG 235771 Query 213579 TTCTGGTGGTTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGT 213637 ||||| ||||| ||| ||||| | ||| | |||||||| |||||||| ||| ||||| Sbjct 235770 TTCTGCTGGTTGGAC-TTGCGGTTGCATGTGTCCTTGTACAGCATGTACGGGTTTCCGGT 235712 Query 213638 CTCTAGCTGGGACACCAG 213655 || | ||| || | ||| Sbjct 235711 TTCCACCTGCGAGAACAG 235694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931500766915840