Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq41 93.3 7e-14 >seq41 Length=668564 Score = 93.3 bits (102), Expect = 7e-14 Identities = 156/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | |||||| | || || || || || ||| | || || || | | Sbjct 25085 TGCAGATCTTTGTGAAAACACTGACTGGGAAGACCATCACTTTGGAAGTTGAGTCTTCAG 25144 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || || || ||| || || || ||||| || || || | Sbjct 25145 ATACAATTGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCTCCAGACCAGC 25204 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||||||||| || || ||| | || ||| | || || | ||||| |||| Sbjct 25205 AACGCCTCATTTTTGCTGGAAAGCAACTTGAGGATGGACGCACACTAGCGGATTACAATA 25264 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | |||||||| |||||| | |||||||| | || || ||||||| Sbjct 25265 TTCAAAAAGAGTCGACTCTGCATTTAGTCCTTCGTTTGCGAGGAGG 25310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786139365702920