Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq297 113 5e-20 >seq297 Length=204439 Score = 113 bits (124), Expect = 5e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 147114 CTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGC 147173 |||||| | |||||||| ||||| || |||||| |||| ||| | |||||||||||| Sbjct 30296 CTGGCAAAACATGTGGCAGGGCGGAAGGGCCATGATAGGCAAGTCAGAGGGGTTCCAGGC 30237 Query 147174 CGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAG 147233 || || || | || | | || || | | |||| |||| | || | | || || Sbjct 30236 CGTGAGGACGTGGCGGCGCCCTTCCGGATCCTTCTTGATCTGCTGTATGAGCTGCCGCAA 30177 Query 147234 CTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAAAGT 147292 ||| ||||| || || || | ||||| | | ||| ||| |||| |||| || |||| Sbjct 30176 CTGATCCACCCCTTGCCCACTGTAGTCGG-CGTGCATGTCGCTGTACTTGGCTCCGAAGT 30118 Query 147293 GCCTCCACTGGAAGCCGTACACTGGCCCCAGGTC 147326 ||| |||||| ||||||||||| ||||||||||| Sbjct 30117 GCCGCCACTGAAAGCCGTACACGGGCCCCAGGTC 30084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583467935306400