Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq297 104 2e-17 >seq297 Length=204439 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 30082 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 30141 |||||| || ||||| ||||||| |||||| |||||||||||| | || | Sbjct 30284 GTGGCAGGGCGGAAGGGCCATGATAGGCAAGTCAGAGGGGTTCCAGGCCGTGAGGACGTG 30225 Query 30142 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 30201 ||| | |||| || | ||| |||| | | | | | ||| |||||||||||| Sbjct 30224 GCGGCGCCCTTCCGGATCCTTCTTGATCTGCTGTATGAGCTGCCGCAACTGATCCACCCC 30165 Query 30202 CATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAA 30261 ||| |||||| || |||||| |||||| |||||||| |||| |||||| || Sbjct 30164 TTGCCCACTGTAGTCGGCGTGCATGTCGCTGTACTTGGCTCCGAAGTGCCGCCACTGAAA 30105 Query 30262 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 30296 |||||||| || |||||||| ||||||||||| Sbjct 30104 GCCGTACACGGGCCCCAGGTCCATCTCTTCCCTGT 30070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406296777301092