Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq28 93.3 8e-14 >seq28 Length=264079 Score = 93.3 bits (102), Expect = 8e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || ||||||||||| || || || ||||||||| || | ||| ||||| |||||| Sbjct 66571 GTGGCCTTTGCTGCTGTGGAGGGCATCTTCTTTTCCGGCTCCTTCTGCTCCATCTTCTGG 66512 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | || | |||| || || |||| ||||| ||| |||| || | ||| Sbjct 66511 CTCAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCCCGTGAC 66452 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGT 102071 || || || || ||||||||||||| |||||| Sbjct 66451 GAGGGCCTGCACACCGACTTTGCATGCCTGCTGT 66418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989551883979015