Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq28 114 2e-20 >seq28 Length=264079 Score = 114 bits (126), Expect = 2e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633 ||| || ||||| || ||| |||||| |||||||| | || | ||||| |||| Sbjct 66418 ACAGCAGGCATGCAAAGTCGGTGTGCAGGCCCTCGTCACGGGAGATGAGCTCGTTGGAAA 66477 Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693 | || || |||||||| ||||||||||| || ||||| || ||||| ||| || |||| Sbjct 66478 AGGTCAGGCCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGG 66537 Query 33694 AAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 |||||||||| || || || ||||||||||| Sbjct 66538 AAAAGAAGATGCCCTCCACAGCAGCAAAGGC 66568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629797658400240