Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq28 104 2e-17 >seq28 Length=264079 Score = 104 bits (114), Expect = 2e-17 Identities = 117/154 (76%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATT-TGCGGCCATATTCTGG 22806 |||||||||| ||||| || ||| || | ||||| || || || ||| |||| |||||| Sbjct 66570 TGGCCTTTGCTGCTGTGGAGGGCATCTTCTTTTCCGGCTCCTTCTGCT-CCATCTTCTGG 66512 Query 22807 CTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGAC 22866 || ||||| ||| |||||||| || || | |||||||||||| | || ||||||| Sbjct 66511 CTCAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCCCGTGAC 66452 Query 22867 GAAGGTCTACACTGTGACTTTGCTTGTATGCTGT 22900 || || || ||| |||||||| || |||||| Sbjct 66451 GAGGGCCTGCACACCGACTTTGCATGCCTGCTGT 66418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356222602734799