Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq28 118 2e-21 >seq28 Length=264079 Score = 118 bits (130), Expect = 2e-21 Identities = 126/164 (77%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| || ||||| || ||| |||||| |||||||| | || || |||||||||| Sbjct 66418 ACAGCAGGCATGCAAAGTCGGTGTGCAGGCCCTCGTCACGGGAGATGAGCTCGTTGGAAA 66477 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 | || || |||||||| ||||||||||| || ||||| || ||||| ||| || || || Sbjct 66478 AGGTCAGGCCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGA-GCAGAAGGAGCCG 66536 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTC 50114 ||||||||||| || || || || |||||||| || || | ||| Sbjct 66537 GAAAAGAAGATGCCCTCCACAGCAGCAAAGGCCACTAGGCGCTC 66580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718246057814120