Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq28 100 4e-16 >seq28 Length=264079 Score = 100 bits (110), Expect = 4e-16 Identities = 115/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116 ||| || ||||| || ||| |||||| ||||| || | || | |||||||||| Sbjct 66418 ACAGCAGGCATGCAAAGTCGGTGTGCAGGCCCTCGTCACGGGAGATGAGCTCGTTGGAAA 66477 Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA-AATGATCCA 42175 | || || |||||||| ||||||||||| || ||||| || || || ||| || || || Sbjct 66478 AGGTCAGGCCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGA-GCAGAAGGAGCCG 66536 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207 ||||||||||| || || || || |||||||| Sbjct 66537 GAAAAGAAGATGCCCTCCACAGCAGCAAAGGC 66568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671117950055080