Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq28 120 4e-22 >seq28 Length=264079 Score = 120 bits (132), Expect = 4e-22 Identities = 117/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 33296 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 33355 ||| || ||||| || ||| |||||| |||||||| | || || |||||||||| Sbjct 66418 ACAGCAGGCATGCAAAGTCGGTGTGCAGGCCCTCGTCACGGGAGATGAGCTCGTTGGAAA 66477 Query 33356 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAG 33415 | || || |||||||| ||||||||||| || ||||| || ||||| ||| || || | Sbjct 66478 AGGTCAGGCCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGG 66537 Query 33416 AAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 |||||||||| || || || ||||||||||| Sbjct 66538 AAAAGAAGATGCCCTCCACAGCAGCAAAGGC 66568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622927475934280