Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq449 127 3e-24 >seq449 Length=50303 Score = 127 bits (140), Expect = 3e-24 Identities = 151/202 (75%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 126180 GGTGTAAATGTAGCGGGGAGCTGCC-GAATCCTTGCCTCCCTCCAACCGCGTGCCAAACT 126238 |||||| ||||| ||||| |||| | | ||||||||| |||| || |||||||||||||| Sbjct 36797 GGTGTAGATGTAACGGGG-GCTGGCAGCATCCTTGCCACCCTGCAGCCGCGTGCCAAACT 36739 Query 126239 GACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGA 126298 |||| ||| ||| || | | ||||||| |||||||||||||| || | |||| Sbjct 36738 GACCTGAGGGCACCAGCAGGTTGATGTTGTTGGAGCCCACAAAGTCCTGTGCCAGGTTGA 36679 Query 126299 CAATGGTCTCGCACAGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGC 126358 ||||| || ||||| | ||||||||| | ||| | | ||||||| ||| || | Sbjct 36678 TGATGGTGGCGGACAGGGACGCCTCGCCGTGGTGGTACGCCGAGTGCTCGGACACATAAC 36619 Query 126359 CGCTCAGCTGCGCAACCTTGAT 126380 | ||||||| | |||||||| Sbjct 36618 CTGCCAGCTGCACCACCTTGAT 36597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611372641800800