Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq27 342 9e-89 seq28 102 2e-16 seq493 98.7 2e-15 seq2016 93.3 8e-14 seq2326 89.7 9e-13 seq533 87.8 3e-12 seq503 87.8 3e-12 seq449 87.8 3e-12 seq278 86.0 1e-11 >seq27 Length=268247 Score = 342 bits (378), Expect = 9e-89 Identities = 816/1211 (67%), Gaps = 56/1211 (5%) Strand=Plus/Plus Query 224462 ACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAAGCGACTCGCGGTCA 224521 || || ||||||||||| | || | || | |||||||| || || |||||||| Sbjct 219688 ACCACGCCGCCGCCGAACGCCTTGATCGCCTCGGCCAGCGCGCCCAGGGAGTCGCGGTCC 219747 Query 224522 AGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCACAGGGCTGCACCA 224581 ||| |||| || ||||| || || | | | ||||||| | ||||| ||| || || Sbjct 219748 AGGTAGTTGGTGGGCTCGTCGAGCACCAGGATGTGGGGGTTGTTCCACATGGCCGCGCCC 219807 Query 224582 ACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCGAGTGAGTCGTGAAT 224641 | ||||| ||| |||||||| ||||| || |||||||| || ||||||| || | ||| Sbjct 219808 AGCACCACCTTGACCTTCTGGCCGCCCGACAGGCCGCGCATGAGCGAGTGGGTGGAGAAC 219867 Query 224642 TCGGGGTCAAGACCAATCTTGGCCATATGGTCCTCGATGTTCTTGGCAGTCAGGGGCTTT 224701 |||| || || |||| | | | || | || || ||| | ||||||||||| Sbjct 219868 TCGGACTCGAGGCCAAAGTCCTCGAGGTGCTTCTGGACGTTGAGCGAGGTCAGGGGCTTG 219927 Query 224702 CCAAGGAGACCGT--TGGCAGCAGCATCCTTGGCGTCAATGTCGGCAAGCAGCTTCTGGA 224759 | | ||| ||| ||| || || |||||||| || | || | | || ||||| | Sbjct 219928 GCCATGAGGCCGGCCTGG--GCCGCCTCCTTGGCATCCACCTCCACCACCATCTTCTCAA 219985 Query 224760 AACCGAATTCCTCGAGCTTCTCGCGGACCATCCAGGAAG-------CAGACTCGTCGTTC 224812 | || | | | | || | || ||| |||||| | | | | || | | Sbjct 219986 AGCCCATCTGCACCAGGTCGTCACGGGGCATCCAC-ACGTTCTTGTCGGGGCCGCAGCCC 220044 Query 224813 TTCCAGAACACCTCATACTCGTAGGTGCGCTTGAACTTGCGGCGGCCACCAATACGGTCC 224872 ||| |||||| ||||||||| || ||||| |||||| ||||| || || ||| Sbjct 220045 ACCCACTGCACCTCGTACTCGTAGCTGGACTTGAGCTTGCGACGGCCCAGGATGCGCTCC 220104 Query 224873 AGG---CGCTTCTTGACGCCGTCCACTACCTTGATTTCGTACATCTTCTCGGTGTCCACG 224929 | | ||||||| | || | ||| | || | || |||||||| || ||| | Sbjct 220105 ACGACGCGCTTCTGGCCGTCAATCACGATCTGC--TGCGC-CATCTTCTTGGCCTCCTCC 220161 Query 224930 GCGCTCCGCTCTGCGCGATCAACC---------GACTCCAGGTCCTGGCCTGAGGCATAC 224980 | | | |||| ||| |||||| | ||| |||||| || || || Sbjct 220162 TCAGT--GATCTG-GCGGTCAACCTTGTTCAGCGCCTCACGGTCCTCACCAATCGCGTAG 220218 Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||||||| | |||| | |||||||| | ||| || |||||||| || Sbjct 220219 CGCCACTGGATGTACTGGTTCGCGGTCTTCTCCAGGTGCTGCTCGATGTGGTGGAACGCG 220278 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCC-CG-AGTCG 225098 ||||| || |||||||| || |||| |||||| ||||||||||| | |||| || || | Sbjct 220279 TGCTGCGCCACGTACGCGATACGCAGGTTGGGGTGCTTCCACACGGTGCCCTCGCAG--G 220336 Query 225099 GTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAA 225158 | | ||||||||| || | |||||| | || | |||||| || || |||| ||| | Sbjct 220337 GCTCCATCTCGCCGGTCAGCAGCTTGATCATGGTCGACTTGCCGGCGCCGTTGGCGCCCA 220396 Query 225159 TCACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAA---GATCT-CA 225214 ||| | | ||||| |||| | | | | ||||| | | | ||| | Sbjct 220397 GCACCGCCACACGGGAGGACAGGGTGATGTAGATGGACACGTCGGACAGCGTGTTCTTCT 220456 Query 225215 GGGCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTGGAA 225274 |||| | |||| ||| | || || ||| | |||||| |||||||| Sbjct 220457 CGGCCT-TGGGGTACTTGAAGCCGACCTTCATCATCTTGAGGATGGCCTTGTCCTTGGTC 220515 Query 225275 GTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTCAGG 225334 | | |||||||||||| |||||||| ||||||| | | | | | || ||| Sbjct 220516 TTGACACCCTCCAGGAAGCCGGGCTCAGGGAACTTGAAGGAGATGGGGGAGGCCGACAGC 220575 Query 225335 TCGTAGTAAGATGCAGCCTCGGGTCGCTT-TGC--CACGAAAGCAGACAGGTTTCCGAGG 225391 |||||||| || |||||||| ||| ||| |||||| | |||||||| ||| || Sbjct 220576 TCGTAGTAGGAGCGCGCCTCGGG---CTTCTGCTTCACGAACTCGGACAGGTTGCCGCGG 220632 Query 225392 TGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT--TGCCG-AGCACACTGCGTCA 225448 | || |||||||| |||||| |||| || | || || | |||| | ||| Sbjct 220633 TAGATCTTGAGCTTGCGGTTCT---CGTAGTGCAGGATGTTGGTGCAGCAGAA---GTCG 220686 Query 225449 AGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGC 225508 || |||||||||||||||||||| |||| || | ||||| |||||||| |||| Sbjct 220687 AGAAAGCCAGAGTCGTGGGACACCATGACTGAGGTCACGTGGGTCAGGCCGACCAGGTA- 220745 Query 225509 GTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAG 225567 || || ||||| ||||||||| |||||||| ||||| || || || ||||| ||||| Sbjct 220746 GTTCTGCAGCCACGCCACGTTGTGGACGTCCAGATGGTTGGTGGGCTCATCCAGCAGCAG 220805 Query 225568 GATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGA 225627 |||||| || | || ||||| |||| || | ||||||||| |||||||| ||||| Sbjct 220806 GATGTCGGCCTTCTGCAGCATGGCACGCGCCAGCGCCAGCTTCATCTTCCAGCCGCCGGA 220865 Query 225628 CAGGGAGCCGA 225638 |||| | ||| Sbjct 220866 AAGGGCGGCGA 220876 Score = 96.9 bits (106), Expect = 6e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225714 CGGCAACGTTGGGGTCGGACGAGAGGTAATCATATACGGTCATGTCCGAGACAGACGCGT 225773 |||||| | ||||||| || ||| | | || ||| | ||| | || || ||| Sbjct 221224 CGGCAAAGGTGGGGTCAGAGAAGATGAACTCCACGGGGGTGAAGTCGGCCACGGAGCCGT 221283 Query 225774 CAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCT 225833 |||||||||| ||||||||||| ||| |||| || | ||||||||||| | || Sbjct 221284 CAATGTCGTGCTCCACGTACACGGTCTTCAGCTCAGTCGGGGGAGGGAAGCCCTCGACCT 221343 Query 225834 GGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGC 225893 |||| || || || || || | ||| || |||||| ||||||||||| ||| || | Sbjct 221344 GGCCGTTGGCGATGGCGCGCATCAGCGTGGACTTGCCAGCGCCGTTGGGGCCGCACAGAC 221403 Query 225894 CGTAATGATTCCCGCGCT 225911 ||||| | || || |||| Sbjct 221404 CGTAACGCTTGCCACGCT 221421 >seq28 Length=264079 Score = 102 bits (112), Expect = 2e-16 Identities = 116/151 (77%), Gaps = 6/151 (4%) Strand=Plus/Plus Query 10253 GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCC 10312 ||| ||||||||||| ||| ||||| ||||||||| || ||| ||||||||||| || Sbjct 66440 GTGCAGGCCCTCGTCACGGGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGGCC 66499 Query 10313 CCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGA--CCCTCCAC- 10369 || || |||||||| |||| |||||| || ||| ||| |||||| |||||||| Sbjct 66500 ACGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCG--GAAAAGAAGATGCCCTCCACA 66557 Query 10370 GCACACCCAGGCGACGAGGCGCTCTGCGAAG 10400 ||| | |||| || |||||||| || ||| Sbjct 66558 GCA-GCAAAGGCCACTAGGCGCTCAGCAAAG 66587 Score = 87.8 bits (96), Expect = 3e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || | ||| ||||||||| ||||| ||| |||||||||| |||||||| Sbjct 65732 CATGACACCTGACTTTTGGTACTCCCCCACCCGCTTCTCAAAGAAGTTGGTCTTGCCCTG 65791 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTT 10027 ||||| |||| |||||| ||||||||||||| Sbjct 65792 CAGGGAGATGATCTCCATCCAGTCAAAGGGGTT 65824 >seq493 Length=45929 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| || ||||| ||||||| |||||||||||||| || || || || Sbjct 45804 CCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCTGAAGACTCGACCTCA 45745 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| || || || |||||||||||||| |||||||| Sbjct 45744 AGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 45701 Score = 93.3 bits (102), Expect = 8e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | |||| ||| ||||||||||| || |||||||| || |||| Sbjct 45699 CCACCGCGCAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 45640 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || ||| Sbjct 45639 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGA 45580 Query 68355 ATGCCT 68360 |||||| Sbjct 45579 ATGCCT 45574 >seq2016 Length=2168 Score = 93.3 bits (102), Expect = 8e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| || ||||| ||||||| ||| |||||||||| || || || || Sbjct 1716 CCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCAATGGTGTCTGAGGACTCAACCTCA 1775 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| || || || |||||||||||||| |||||||| Sbjct 1776 AGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 1819 Score = 87.8 bits (96), Expect = 3e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | |||| ||| ||||||||||| || |||||||| || |||| Sbjct 1440 CCACCGCGCAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 1499 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || ||| Sbjct 1500 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGA 1559 Query 68355 ATGCCT 68360 || ||| Sbjct 1560 ATACCT 1565 Score = 87.8 bits (96), Expect = 3e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | |||| ||| ||||||||||| || |||||||| || |||| Sbjct 1821 CCACCGCGCAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 1880 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || ||| Sbjct 1881 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGA 1940 Query 68355 ATGCCT 68360 || ||| Sbjct 1941 ATACCT 1946 >seq2326 Length=1360 Score = 89.7 bits (98), Expect = 9e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| || ||||| ||| || |||||| ||||| | ||| || || ||| Sbjct 910 CCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATCGTGTCAGATGACTCGACCTCC 969 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| || || || |||||||||||||| |||||||| Sbjct 970 AGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 1013 Score = 87.8 bits (96), Expect = 3e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | |||| ||| ||||||||||| || |||||||| || |||| Sbjct 646 CCACCGCGCAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 705 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || || Sbjct 706 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 765 Query 68355 ATGCCT 68360 |||||| Sbjct 766 ATGCCT 771 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| || ||||| ||| || |||||| |||| | ||| || || ||| Sbjct 121 CCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATCATGTCAGATGACTCGACCTCC 180 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| || || || |||||||||||||| |||||||| Sbjct 181 AGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 224 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| || ||||| ||| || |||||| ||||| | ||| || || ||| Sbjct 541 CCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATCGTGTCAGATGACTCGACCTCC 600 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| || || || || ||||||||||| |||||||| Sbjct 601 AGGGTGATGGTCTTGCCGGTCAGTGTCTTGACGAAGATCTGCAT 644 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | |||| ||| ||||||||||| || |||||||| || || | Sbjct 1015 CCACCGCGCAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCC 1074 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || || Sbjct 1075 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 1134 Query 68355 ATGCCT 68360 |||||| Sbjct 1135 ATGCCT 1140 >seq533 Length=40786 Score = 87.8 bits (96), Expect = 3e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | |||| ||| ||||||||||| || |||||||| || |||| Sbjct 40475 CCACCGCGCAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 40534 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || || Sbjct 40535 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 40594 Query 68355 ATGCCT 68360 |||||| Sbjct 40595 ATGCCT 40600 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| || ||||| ||| || |||||| ||||| | ||| || || ||| Sbjct 40370 CCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATCGTGTCAGATGACTCGACCTCC 40429 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| || || || || ||||||||||| |||||||| Sbjct 40430 AGGGTGATGGTCTTGCCGGTCAGTGTCTTGACGAAGATCTGCAT 40473 >seq503 Length=44646 Score = 87.8 bits (96), Expect = 3e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| |||||||| ||| ||| |||||| ||||| | || || || ||| Sbjct 44312 CCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATAGTGTCGGAGGACTCCACCTCC 44253 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTG 68458 | |||||| || || ||||| |||||||||||||| ||||| Sbjct 44252 AGGGTGATCGTCTTGCCCGTAAGGGTCTTGACGAAGATCTG 44212 >seq449 Length=50303 Score = 87.8 bits (96), Expect = 3e-12 Identities = 120/167 (72%), Gaps = 8/167 (5%) Strand=Plus/Plus Query 173127 CGCAGACCCATGTGGACAACTCGTTCGGTAACTCGCTGGCATTTACCATGAACAACGTCT 173186 ||||||| || || |||||||||||||| || || |||| || |||||||||||| | Sbjct 21518 CGCAGACGCACGTCGACAACTCGTTCGGCAATTCTTTGGCCTTCACCATGAACAACACTT 21577 Query 173187 ACGGGACCCACGTTCTCCTGGAATGCGCGAGGCTCTATGGCGG----TGTCCAGCGGTTC 173242 | || || ||||| || || || ||| | ||||| | ||| |||| ||| Sbjct 21578 ATGGCACTCACGTCCTGCTTGAGGCAGCGCG----CATGGCAGGGACAGTCAAGCGATTC 21633 Query 173243 ATCAATGTGTCTACCGACGAAGTATACGGCGAGAGCAGTCTGGGCAA 173289 |||||||| || ||||| || || ||||||| ||| ||||||| Sbjct 21634 ATCAATGTCAGCACGGACGAGGTCTATGGCGAGACCAGCTTGGGCAA 21680 Score = 87.8 bits (96), Expect = 3e-12 Identities = 264/407 (65%), Gaps = 3/407 (1%) Strand=Plus/Minus Query 176172 TCCTCG---AGGTAGTTCAGCAGACGCTCGTCGGCCTTGTGGAAAATATCCCGGGTGTTG 176228 |||||| ||||| |||||| | ||||| |||| || ||| | | || ||| | Sbjct 36868 TCCTCGTTCAGGTACGCCAGCAGCTGGTCGTCCGCCTCGTTGAACAGGTGGCGCGTGAGG 36809 Query 176229 GGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTCCTTGCCTCCGTGAAGGCGG 176288 || | || | ||| |||| || | | ||| |||||||| || || || || Sbjct 36808 GGCGCCATGCGGGTGTAGATGTAACGGGGGCTGGCAGCATCCTTGCCACCCTGCAGCCGC 36749 Query 176289 GAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATTCGAACCCACGTAGTCTTGG 176348 | || || || || || | |||| |||||||| || || ||||| |||| || Sbjct 36748 GTGCCAAACTGACCTGAGGGCACCAGCAGGTTGATGTTGTTGGAGCCCACAAAGTCCTGT 36689 Query 176349 GCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGTGGTGATAGCCGGCGTTCTCA 176408 |||| || |||| | | || ||||||||||||||||| || | | || ||| Sbjct 36688 GCCAGGTTGATGATGGTGGCGGACAGGGACGCCTCGCCGTGGTGGTACGCCGAGTGCTCG 36629 Query 176409 CTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCTTGTACGAGGTTGCGCTTCAACGCC 176468 || || || | |||| | || ||||| || |||||||||||| || Sbjct 36628 GACACATAACCTGCCAGCTGCACCACCTTGATGTCCGACTTGAGGTTGCGCTTGAAGCAT 36569 Query 176469 GAGAACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGACGACCGACGGAATGGAACGC 176528 ||||| || ||||| ||||| ||||||||||| || || | || ||||| ||| Sbjct 36568 GAGAATAGGATCTTGCGCTGGCCAGGCTTCAGACCGTCCACCATGCTGGGGATGGATCGC 36509 Query 176529 TCTACATCGTATCTTGAAAAAAGGATAAGGTCTTTGTTTATGAAATC 176575 || | || | || || ||||| || || ||||| ||||| || Sbjct 36508 TCCAGGTCAGCGCGCGAGAAGAGGATGAGCTCCTTGTTGATGAACTC 36462 >seq278 Length=83558 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225776 ATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGG 225835 |||||||| ||||| || || || || ||||| | |||||||| |||| || | Sbjct 24411 ATGTCGTGCTCCACATAGACAGTGCGCAGCTGGTCCGGGGGTGGGAAGCCGTCCACCTTG 24352 Query 225836 CCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCG 225895 |||||||| || | ||| || ||||||| | ||||||| |||| |||||| Sbjct 24351 TTCGCAGCAATCGCGCGCATCAGCGTCGACTTGCCCACTCCGTTGGCACCGCACAGGCCG 24292 Query 225896 TAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAG 225955 || | |||||||||||| |||| | | |||||| |||||||| || || || Sbjct 24291 TAGCGGCGGCCGCGCTTGATGATGAGCCTTGCATTGTTCAGCAGGATCTTCCCGCCGTAC 24232 Query 225956 GCAAGGGAGAACTCGCA 225972 || || ||||| || || Sbjct 24231 GCGAGTGAGAATTCACA 24215 Score = 86.0 bits (94), Expect = 1e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 225510 TGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGA 225569 |||||||||| ||||||| || ||||| |||||| || || || ||||| || |||| Sbjct 25442 TGATGAGCCACTGCACGTTGGTGGTGTCCAAGTGGTTGGTGGGCTCATCCAGCAGGAGGA 25383 Query 225570 TGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCC 225621 ||||||||| | || || || | || || | ||||||||| |||||||| Sbjct 25382 TGTCAGCATGCAGCAGCATCGCCCTCGCCAGCGCCAGCTTCATCTTCCAGCC 25331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921593219130760