Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq449 98.7 2e-15 >seq449 Length=50303 Score = 98.7 bits (108), Expect = 2e-15 Identities = 207/309 (67%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 325342 ATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTT 325401 |||||| |||||||||| | || || ||||| || |||| || | ||||||||| Sbjct 36770 ATCCTTGCCACCCTGCAGCCGCGTGCCAAACTGACCTGAGGGCACCAGCAGGTTGATGTT 36711 Query 325402 ATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCC 325461 ||| || ||| | |||||||| ||||| | |||||| | ||| || || ||||| Sbjct 36710 GTTGGAGCCCACAAAGTCCTGTGCCAGGTTGATGATGGTGGCGGACAGGGACGCCTCGCC 36651 Query 325462 ATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGT 325521 ||||| || || ||||| | || ||||| | ||| | ||||| | ||| | Sbjct 36650 GTGGTGGTACGCCGAGTGCTCGGACACATAACCTGCCAGCTGCACCACCTTGATGTCCGA 36591 Query 325522 CGTCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATC 325581 | | | ||||||||||| ||| ||| | || || || ||| || | ||| || Sbjct 36590 CTTGAGGTTGCGCTTGAAGCATGAGAATAGGATCTTGCGCTGGCCAGGCTTCAGACCGTC 36531 Query 325582 AACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGAGAACAAAATAAGTTCCTTGTC 325641 || | || ||| ||| ||||| || |||||||| | || || ||||||| Sbjct 36530 CACCATGCTGGGGATGGATCGCTCCAGGTCAGCGCGCGAGAAGAGGATGAGCTCCTTGTT 36471 Query 325642 GATGAAGTC 325650 |||||| || Sbjct 36470 GATGAACTC 36462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179616115422374