Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= NC_019507.1 Length=182833 Score E Sequences producing significant alignments: (Bits) Value seq869 86.0 7e-12 >seq869 Length=17817 Score = 86.0 bits (94), Expect = 7e-12 Identities = 88/112 (79%), Gaps = 5/112 (4%) Strand=Plus/Minus Query 167469 TCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACCAGA 167528 ||||| ||| ||||||||||||| || ||| || ||||||| || |||||| |||| | Sbjct 12277 TCGGGATGACAGGATTCGAACCTGCGACCCTATGCTCCCAAAGCACATGCGCT-ACCAAA 12219 Query 167529 CTGCGCTACACCCCGAAAATTATAAA---TTTTC-AATCATATTTATAATTA 167576 |||||||||| ||||| ||||| || ||||| || |||||| | || || Sbjct 12218 CTGCGCTACATCCCGATGATTATCAATGTTTTTCAAAACATATTCAAAAGTA 12167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584919079413240