Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq7 168 1e-35 seq2219 165 1e-34 seq430 165 1e-34 seq42 165 1e-34 seq471 156 6e-32 seq74 150 3e-30 seq103 147 3e-29 seq386 138 2e-26 seq59 136 6e-26 seq875 134 2e-25 seq28 125 1e-22 seq115 104 3e-16 seq27 93.3 6e-13 >seq7 Length=421595 Score = 168 bits (186), Expect = 1e-35 Identities = 209/285 (73%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 259894 CATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 |||||| ||| | |||||| || | ||||| ||||| || ||||||| || || Sbjct 312227 CATGTCTGAGCGCTGGTTCACGCACGCCTCCCCCACCCTCTTCAACTCCGGCACCCCCCG 312286 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTG---GACATGAAGGCCGATTCGATCGAGGGCAT 260010 ||| ||| || || ||||| ||| || | || ||| |||||| ||||| ||||| Sbjct 312287 CCCCCAGCTGTCCTCCTGCTTCCTGGTGTGTGCCAAGAA---CGATTCCATCGACGGCAT 312343 Query 260011 CTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGC 260070 |||||||||||||||| |||| || | ||||||||| |||||||||||||||| | | Sbjct 312344 CTATGACACGCTCAAGGAGTGTGCTGTGATCTCCAAGTCGGCCGGCGGCATCGGCCTCTC 312403 Query 260071 CGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGG 260130 | ||||| | || ||| | ||| | ||| | ||||||||||| |||||||| Sbjct 312404 CATCCACAACATACGTGCCACCGGCTCGTACATCCGCGGCACCAACGGTACCTCCAACGG 312463 Query 260131 CCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGT 260175 ||||||||||||| ||||| || || ||||| || || || || Sbjct 312464 TGTTGTGCCCATGCTGCGCGTCTTCAATGACACTGCCCGGTATGT 312508 Score = 152 bits (168), Expect = 7e-31 Identities = 343/507 (68%), Gaps = 19/507 (4%) Strand=Plus/Plus Query 262875 CCGCTGGGACTGGGACGCACTGCGGGCGTCGGTT--CGACAGCATGGCCTGCGCAACTCG 262932 |||||||||||||| | ||||| || || || || | ||| ||||||||||| Sbjct 314119 CCGCTGGGACTGGGCTGGCCTGCGCGCAGACATTGCCGCCAAC--GGCGTGCGCAACTCG 314176 Query 262933 TTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCG 262992 |||| |||||| ||||||||| || | || || ||||| ||||| |||| |||| Sbjct 314177 CTGCTGCTGGCGCCCATGCCCACCGCATCCACCTCCCAGATTCTGGGTAACAACGAGTGC 314236 Query 262993 TTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTG 263052 || ||| | ||| |||||||||| |||||||||||| |||||||| || || || Sbjct 314237 TTTGAGCCCTACACCTCCAACATCTACGTGCGCCGCGTGCTGTCGGGCGAGTTCACGGTC 314296 Query 263053 GTCAACCGCCACCTGGTCAAGCGCATGGTGGCGC-GCGGCCTGTGGACGCCCGACTTTCG 263111 || |||| |||||| | | || || ||| |||||||||| || || || Sbjct 314297 GTGAACCAGCACCTGCTGCA-CGACCTGTACCGCATGGGCCTGTGGAACCCTGA-GATCA 314354 Query 263112 CGACCG-GCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGC 263170 || || ||| | ||||| | || || || |||| | ||| | || | || || Sbjct 314355 AGAACGAGCTGGTGGCGGCCAACGGGTCAGTCCAGGCTCTGGACATCCCTGATGAGCTGC 314414 Query 263171 CCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGATA 263230 | | || | |||||| ||||||||| | | || ||| | || | Sbjct 314415 GC---------TCCCTGTACAAGACGGTGTGGGAGATCAAGCAGCGTGTGCTGGTGGACA 314465 Query 263231 TGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCG 263290 |||| || || || | | ||| ||||||||||||||||| ||||| ||| | | | | Sbjct 314466 TGGCCGCGGATCGTGGGGCCTTCATCGACCAGAGCCAGTCGTTCAACGTGTTCATGCCGG 314525 Query 263291 A-CCCGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAG 263349 | ||| || | | ||| ||||||| | ||| || |||||| ||||||||| Sbjct 314526 ACCCCAACTTCGGCAAGC-TCACGTCCCTACACTTTTACGCGTGGAAGAAGGGCCTCAAG 314584 Query 263350 ACTGGCATGTACTATCTGCGCACCCGG 263376 || ||||||||||| |||||||| ||| Sbjct 314585 ACCGGCATGTACTACCTGCGCACACGG 314611 Score = 134 bits (148), Expect = 2e-25 Identities = 183/254 (72%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 || || ||||||||||||||||||||||| |||| |||| || |||||||| ||| | Sbjct 312754 GGTGGTGGCAAGCGCAAGGGCGCCTTTGCTATCTACATGGAGCCCTGGCACGCAGACGTG 312813 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 | | | || ||||| |||||||||||||| ||||| || | ||||||| Sbjct 312814 TTTGAGTTCCTAGACCTACGCAAGAACCACGGCAA-GGAGGAGG-----CACGCGCGCGT 312867 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 || ||||||||||||||||||| |||||||| ||| || ||| || | | Sbjct 312868 GACCTCTTTTACGGCCTGTGGATCAATGACCTGTTCATGGAGCGTGTGGAGAACAACGAG 312927 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 |||||||| || || ||||| ||||||||| ||||| ||| |||| ||| || Sbjct 312928 GACTGGTCCCTGTTCTGCCCCAACGAGGCGCCTGGCCTCGCCGACTGCTGGGGCAAGGAT 312987 Query 262028 TTTGACGCCCTCTA 262041 || ||||| || || Sbjct 312988 TTCGACGCGCTGTA 313001 Score = 122 bits (134), Expect = 1e-21 Identities = 168/231 (73%), Gaps = 7/231 (3%) Strand=Plus/Minus Query 1456082 ACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGA 1456141 || |||||||||| |||||| |||| ||||| | ||| | || |||||| ||||||| | Sbjct 151593 ACGACCTCTTTCGTGCCATCCACACAGTGCCCACTGTGGGCAAGAAGGCCAACTGGGCAA 151534 Query 1456142 TGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCC-G 1456200 | ||||||||| | ||| | || ||||| ||||| | |||| |||||| | Sbjct 151533 TCAAGTGGATCTCCTCGGACCGTA-CG----TTTGCTGAGCGCTTGGTCGCGTTTGCCTG 151479 Query 1456201 CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGG 1456260 ||| ||||||||| || || ||| ||||| |||||||| |||||||| ||||| Sbjct 151478 CGTGGAGGGCATCCACTTTTCTGGCTCCTTCTGTGCCATCTTCTGGCTCAAAAAGCGGCT 151419 Query 1456261 CCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAG 1456311 ||||||||||| | ||| ||| |||| | ||| ||| ||||||| Sbjct 151418 GCTCATGCCCGG-CCTCTCCTTCTCAAACGTCCTCATCTCTCGTGACGAAG 151369 Score = 98.7 bits (108), Expect = 1e-14 Identities = 115/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 262076 GTCGTGCCCGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACG 262135 ||||||| ||| | ||| | |||| ||||| ||| ||| || |||||||| |||| Sbjct 313252 GTCGTGCGCGCGCAGCAGCTGTGGTTCGCCATCCTCGAGGCGCAGATCGAGACGGGCAAC 313311 Query 262136 CCCTACATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACC 262195 || |||||| | ||||||||| | ||||| | ||||||||||||||||| ||| Sbjct 313312 CCGTACATGCTGTACAAGGACTCGTGCAACCGCAAGTCTAACCAGCAGAACCTGGGGACC 313371 Query 262196 ACGACAGAG-GCCAACCTGTGCACCGAGATCGT 262227 | | || | ||||||||||||| |||||||| Sbjct 313372 ATCA-AGTGCTCCAACCTGTGCACTGAGATCGT 313403 >seq2219 Length=1609 Score = 165 bits (182), Expect = 1e-34 Identities = 179/235 (76%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||| |||||| || ||| |||||||| | || Sbjct 66 ATCTACAAGGTGCTCAAGCAGGTCCACCCCGACAC---TGGCATTTCCTCCAA---GGCC 119 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 || || ||| | ||||| || || |||||||| ||||| |||| ||||||| Sbjct 120 ATTTCCATCCTCAACTCCTTCGTGAACGACATCTTCGACAAGATCGCGTCCGAGGCGTCC 179 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCC 725087 |||||||| |||| ||||||| || | | || ||| ||||||||||||||||| Sbjct 180 CGCCTGGCCCGCTACAACAAG---AAGCCCACCGTGACGTCCCGCGAGATCCAGACCGCT 236 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||||||| | ||| |||||| ||||||| ||||||||| ||||||||||||| Sbjct 237 GTGCGCCTGGTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 291 >seq430 Length=52317 Score = 165 bits (182), Expect = 1e-34 Identities = 179/235 (76%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||| |||||| |||| ||| ||| |||| || Sbjct 1745 ATCTACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATT-TCCTCCAAGGCC 1798 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 || || ||| | |||||||| || |||||||| ||||| |||| ||||||| Sbjct 1799 ATTTCCATCCTCAACTCGTTCGTGAACGACATCTTCGACAAGATCGCGTCCGAGGCGTCC 1858 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCC 725087 |||||||| |||| ||||||| || | | || ||| |||||||||||||||||| Sbjct 1859 CGCCTGGCTCGCTACAACAAG---AAGCCCACCGTGACGTCCCGCGAGATCCAGACCGCC 1915 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||||||| | ||| || || ||||||| ||||||||| ||||||||||||| Sbjct 1916 GTGCGCCTGGTGCTGCCTGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 1970 >seq42 Length=233901 Score = 165 bits (182), Expect = 1e-34 Identities = 179/235 (76%), Gaps = 12/235 (5%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||| |||||| |||| ||| ||| |||| || Sbjct 187815 ATCTACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATT-TCCTCCAAGGCC 187762 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 || || ||| | ||||| || || |||||||| ||||| |||| ||||||| | Sbjct 187761 ATTTCCATCCTCAACTCCTTCGTGAACGACATCTTCGACAAGATCGCGTCCGAGGCTTCT 187702 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCC 725087 |||||||| |||| ||||||| || | | || ||| ||||||||||||||||| Sbjct 187701 CGCCTGGCCCGCTACAACAAG---AAGCCCACCGTGACGTCTCGCGAGATCCAGACCGCT 187645 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||||||| | ||| |||||| |||||| ||||||||| ||||||||||||| Sbjct 187644 GTGCGCCTGGTGCTGCCCGGCGAGTTGGCCAAGCACGCCGTGTCCGAGGGCACCA 187590 Score = 147 bits (162), Expect = 3e-29 Identities = 175/235 (74%), Gaps = 12/235 (5%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||| |||||| || ||| |||||||| | || Sbjct 120937 ATCTACAAGGTGCTCAAGCAGGTCCACCCCGACAC---TGGCATTTCCTCCAA---GGCC 120884 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 || || ||| | ||||| || || |||||||| ||||| |||| ||||||| Sbjct 120883 ATTTCCATCCTCAACTCCTTCGTGAACGACATCTTCGACAAGATCGCGTCCGAGGCGTCC 120824 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCC 725087 |||||||| |||| ||||||| || | | | ||| |||||||||||||| || Sbjct 120823 CGCCTGGCCCGCTACAACAAG---AAGCCCACTGTGACGTCCCGCGAGATCCAGACTGCT 120767 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||||||| | ||| ||||| ||||||| |||||| || ||||||||||||| Sbjct 120766 GTGCGCCTGGTGCTGCCTGGCGAGCTGGCCAAGCACGCGGTGTCCGAGGGCACCA 120712 >seq471 Length=47721 Score = 156 bits (172), Expect = 6e-32 Identities = 171/225 (76%), Gaps = 12/225 (5%) Strand=Plus/Minus Query 724921 TGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTCGATCA 724980 |||||||||||||||||||| |||| ||| ||| |||| |||| || ||| Sbjct 47721 TGCTCAAGCAGGTGCACCCCGACACCGG-----CATT-TCCTCCAAGGCCATTTCCATCC 47668 Query 724981 TGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGC 725040 | ||||| || || |||||||| ||||| |||| |||||||| |||||||| | Sbjct 47667 TCAACTCCTTCGTGAACGACATCTTCGACAAGATCGCGTCCGAGGCCTCCCGCCTGGCCC 47608 Query 725041 GCTCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCCGTGCGCCTGA 725097 ||| ||||||| || | | || ||| ||||||||||||||||||||||||||| Sbjct 47607 GCTACAACAAG---AAGCCCACCGTGACGTCCCGCGAGATCCAGACCGCCGTGCGCCTGG 47551 Query 725098 TCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | ||| |||||| ||||||| |||||| || ||||||||||||| Sbjct 47550 TGCTGCCCGGCGAGCTGGCCAAGCACGCTGTGTCCGAGGGCACCA 47506 >seq74 Length=182840 Score = 150 bits (166), Expect = 3e-30 Identities = 176/235 (75%), Gaps = 12/235 (5%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| ||||| |||||||| |||||| || ||| |||||||| | || Sbjct 43993 ATCTACAAAGTGCTTAAGCAGGTCCACCCCGACAC---TGGCATTTCCTCCAA---GGCC 43940 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 || || ||| | ||||| || || |||||||| ||||| |||| ||||||| | Sbjct 43939 ATTTCCATCCTCAACTCCTTCGTGAACGACATCTTCGACAAGATCGCGTCCGAGGCTTCT 43880 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCC 725087 |||||||| |||| ||||||| || | | || ||| |||||||||||||| || Sbjct 43879 CGCCTGGCCCGCTACAACAAG---AAGCCCACCGTGACGTCCCGCGAGATCCAGACTGCT 43823 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||||||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 43822 GTGCGCCTGGTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 43768 >seq103 Length=161455 Score = 147 bits (162), Expect = 3e-29 Identities = 168/223 (75%), Gaps = 12/223 (5%) Strand=Plus/Minus Query 724921 TGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTCGATCA 724980 |||||||||||||||||||| |||| ||| ||| |||| |||| || ||| Sbjct 161455 TGCTCAAGCAGGTGCACCCCGACACCGG-----CATT-TCCTCCAAGGCCATTTCCATCC 161402 Query 724981 TGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGC 725040 | ||||| || || |||||||| ||||| |||| ||||||| |||||||| | Sbjct 161401 TCAACTCCTTCGTGAACGACATCTTCGACAAGATCGCGTCCGAGGCTTCCCGCCTGGCCC 161342 Query 725041 GCTCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCCGTGCGCCTGA 725097 ||| ||||||| || | | || ||| ||||||||||||||||||||||||||| Sbjct 161341 GCTACAACAAG---AAGCCCACCGTGACGTCCCGCGAGATCCAGACCGCCGTGCGCCTGG 161285 Query 725098 TCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 | ||| |||||| ||||||| |||||| || ||||||||||| Sbjct 161284 TGCTGCCCGGCGAGCTGGCCAAGCACGCTGTGTCCGAGGGCAC 161242 >seq386 Length=58972 Score = 138 bits (152), Expect = 2e-26 Identities = 173/235 (74%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||| ||||| |||| ||| ||| |||| | Sbjct 14580 ATCTACAAGGTGCTCAAGCAGGTCCACCCTGACACCGG-----CATT-TCCTCCAAGGCT 14633 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 || || ||| | ||||| || || |||||||| ||||| || | ||||||| Sbjct 14634 ATCTCCATCCTCAACTCCTTCGTGAACGACATCTTCGACAAGATTGCGTCCGAGGCATCC 14693 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCC 725087 |||||||| |||| ||||||| || | | || ||| |||||||||||||| ||| Sbjct 14694 CGCCTGGCCCGCTACAACAAG---AAGCCCACCGTGACGTCGCGCGAGATCCAGACAGCC 14750 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||||||| | ||| || || ||||||| ||||||||| || |||||||||| Sbjct 14751 GTGCGCCTGGTGCTGCCGGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 14805 >seq59 Length=202272 Score = 136 bits (150), Expect = 6e-26 Identities = 140/182 (77%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 724964 CAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGA 725023 |||| |||| || ||| | |||||||| || |||||||| ||||| |||| |||| Sbjct 2434 CAAGGCCATTTCCATCCTCAACTCGTTCGTGAACGACATCTTCGACAAGATCGCGTCCGA 2493 Query 725024 GGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCA 725080 ||| |||||||| |||| ||||||| || | | || ||| ||||||||||| Sbjct 2494 GGCGTCCCGCCTGGCCCGCTACAACAAG---AAGCCCACCGTGACGTCCCGCGAGATCCA 2550 Query 725081 GACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 |||||||||||||||| | ||| || || ||||||| ||||||||| ||||||||||| Sbjct 2551 GACCGCCGTGCGCCTGGTGCTGCCTGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 2610 Query 725141 CA 725142 || Sbjct 2611 CA 2612 >seq875 Length=17519 Score = 134 bits (148), Expect = 2e-25 Identities = 168/228 (74%), Gaps = 12/228 (5%) Strand=Plus/Plus Query 724918 AGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTCGA 724977 ||||||| ||||||||||||||| || | ||| ||| |||| | || || | Sbjct 11099 AGGTGCTGAAGCAGGTGCACCCCGACACAGG-----CATT-TCCTCCAAGGCTATTTCCA 11152 Query 724978 TCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGG 725037 || | ||||| || || ||||| || ||||| |||| | | ||||| || |||| Sbjct 11153 TCCTCAACTCTTTCGTGAACGATATCTTCGACAAGATCGCCTCAGAGGCGTCACGGCTGG 11212 Query 725038 CGCGCTCCAACAAGCGCAACACGATCGGCAC---GCGCGAGATCCAGACCGCCGTGCGCC 725094 | |||| ||||||| || | | || || |||||||||||||||||||||||||| Sbjct 11213 CCCGCTACAACAAG---AAGCCTACCGTGACCTCGCGCGAGATCCAGACCGCCGTGCGCC 11269 Query 725095 TGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||| || |||||||||| Sbjct 11270 TGGTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 11317 >seq28 Length=264079 Score = 125 bits (138), Expect = 1e-22 Identities = 131/172 (76%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 1455980 AGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACT 1456039 |||||||| || ||||| |||||||||||||| || ||||||||||| || | |||| Sbjct 66986 AGGCACGTGCCTTCTACGGCTTCCAGATCGCCATTGAGAACATCCACTCCGAGATGTACT 66927 Query 1456040 CGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCA 1456099 | || ||| | || ||||| |||||||||| | |||||| || | || || | |||| Sbjct 66926 CCCTGCTGCTGGAGTCCTACATCAAGGACCCCATGGAGAAGAACAAGCTGTTCCATGCCA 66867 Query 1456100 TCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGAT 1456151 | ||||| ||||| | ||| | || ||||| | ||||| || |||||||| Sbjct 66866 TTGACACCGTGCCTTGTGTGGGCAAGAAGGCGCAGTGGGCCATCAAGTGGAT 66815 Score = 107 bits (118), Expect = 3e-17 Identities = 88/106 (83%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 1456171 ACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTT 1456229 ||||||| ||||| || || | |||||| || || ||||||||||| || || ||| | Sbjct 66588 ACTTTGCTGAGCGCCTAGTGGCCTTTGCTGCTGTGGAGGGCATCTTCTTTTCCGGCTCCT 66529 Query 1456230 TCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||| ||||||| |||||||||||||| |||||||||||||| || Sbjct 66528 TCTGCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGCCT 66483 Score = 87.8 bits (96), Expect = 3e-11 Identities = 93/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 1456521 AGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGG 1456580 |||||||||| ||||| || | ||| ||||| |||||||| ||| | ||||| |||| Sbjct 66206 AGATCATCGTTGAGGCTGTGGCGATTGAGAAGGAGTTTGTGGTCGACGCCCTGCCTGTGG 66147 Query 1456581 CGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640 || ||||||||||||| || ||| ||| |||||||||| | || || |||||||| Sbjct 66146 ACCTGATCGGCATGAACGGCA-AGCTGATGACGCAGTACATTG-AGTTCGTGGCCGACCG 66089 >seq115 Length=153645 Score = 104 bits (114), Expect = 3e-16 Identities = 128/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 1818069 ATGGTAAAGGGCGTCACGCGCTCGGGAAAGGTGAGCGTCTTGACGATCTCATAGGGCACG 1818128 ||| | || ||||||||| ||| || || ||||| || | |||| |||||||| Sbjct 90627 ATGTTGAACGGCGTCACGGTCTCTGGGAACGTGAGGTTCAGGGCGATGGACCAGGGCACG 90568 Query 1818129 CCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTAAAGTTG 1818188 |||| ||| || ||| | || | |||||| ||||||| | || || | ||||| Sbjct 90567 CCCAGCTCATCGATGCCGATGTTGGGGTCCCCTGTGATGACTGTACGGGCAGAAAAGTCC 90508 Query 1818189 ACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGCT 1818243 || |||||||||||| ||||| ||||| | |||||||||||||||| ||||| Sbjct 90507 ACACGCTTGCCCATGAGGTTGCCACGGATGCGACCCTCCTTGCCCTTGAGCCGCT 90453 >seq27 Length=268247 Score = 93.3 bits (102), Expect = 6e-13 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 1601359 CTGCTTGCCCATGGCCGTCTGGTAGATGTTGCGCGGCGCCTGGTTGTGGTTGGAAAACGG 1601418 ||||||||||||||||| |||||| |||| || |||| ||| ||||||| | || || Sbjct 14246 CTGCTTGCCCATGGCCGACTGGTACGTGTTCCGGGGCGACTGATTGTGGTCAGGGAAGGG 14305 Query 1601419 GATGATGGACGCGCAGGCGCCCAGCATGAGCAGCGGGTGGACCTCGACGTGCGT 1601472 ||||| |||||||| ||||||| || | |||||||| |||| |||||| Sbjct 14306 AATGATAGACGCGCACACGCCCAGGATCATGGACGGGTGGATCTCGCAGTGCGT 14359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177566887494346