Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq28 91.5 2e-13 >seq28 Length=264079 Score = 91.5 bits (100), Expect = 2e-13 Identities = 116/157 (74%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || ||||| || |||||||| || | || | ||||| ||||| || || Sbjct 66425 GCATGCAAAGTCGGTGTGCAGGCCCTCGTCACGGGAGATGAGCTCGTTGGAAAAGGTCAG 66484 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAG-ATCCAGAAAAGA 39734 || ||||| || |||||||| |||||||| || |||| |||| ||| | || ||||||| Sbjct 66485 GCCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGG-AGCAGAAGGAGCCGGAAAAGA 66543 Query 39735 AGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTC 39771 ||||||| || || || ||||| || || || | ||| Sbjct 66544 AGATGCCCTCCACAGCAGCAAAGGCCACTAGGCGCTC 66580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686887050750120