Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq1134 491 6e-134 seq1667 414 1e-110 seq1186 340 2e-88 seq1410 324 2e-83 seq681 131 2e-25 >seq1134 Length=9887 Score = 491 bits (544), Expect = 6e-134 Identities = 737/1045 (71%), Gaps = 25/1045 (2%) Strand=Plus/Minus Query 190792 TTGGTTTGATGTGCTTGATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTGGTC 190851 |||||| |||| |||||||||||| | || | || |||||| |||||||||| Sbjct 7937 TTGGTTCGATGACGCAGATGACTGGTTACGTCAAGACCGTTTCGTATTCGTAGGTTGGTC 7878 Query 190852 TGGTCTTATATTATTACCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAACTAC 190911 ||| | ||||||| |||||||||| | | || | ||||||||||| || || || || Sbjct 7877 AGGTTTATTATTATTCCCATGTGCTTACTTTGCATTAGGTGGTTGGTTAACTGGTACAAC 7818 Query 190912 ATTTGTTACTAGTTGGTATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAACTT 190971 |||||||||| ||||| |||||||| | ||| |||| ||| | ||||| ||||| Sbjct 7817 ATTTGTTACTTCATGGTACACACATGGTTTAGCAACTTCTTACTTAGAAGGTTGTAACTT 7758 Query 190972 TTTGACAGCAGCAGTATCCACACCTGGTGATGCTATGGGTCA-TAGTTTATTATTCTTAT 191030 || |||||||| || || || |||| | | |||||| || | || || || | || Sbjct 7757 CTTAACAGCAGCTGTTTCAACTCCTGCTAACAGTATGGGCCACTCACTTCTTTTTGT-AT 7699 Query 191031 GGGGTCCAGAGGCACAAGGTTCATTTGTTCGTTGGTTACAAATTGGTGGACTTTGGAACT 191090 ||||||| || || |||||| || |||||||| ||| | ||||| | ||| | Sbjct 7698 GGGGTCCTGAAGCGCAAGGTGATTTAACACGTTGGTTCCAACTAGGTGGTTTATGGCCTT 7639 Query 191091 TTGTAGCACTTCATGGTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAATTG 191150 | ||||| | || |||| |||||| | || || |||||||||||||| |||||||||| Sbjct 7638 TCGTAGCTTTACACGGTGCGTTTGGTTTAATCGGTTTCATGTTACGTCAATTTGAAATTG 7579 Query 191151 CAGGATTGGTGGGTATTAGACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGTTT 191210 | | | || | | |||||||| || | ||||| || || || | || | Sbjct 7578 CGCGTTCTGTAAACTTACGTCCTTACAACGCAATCGCTTTCTCAGCACCAATTTCTGTAT 7519 Query 191211 TCACAAGTGTATTCTTAATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTCAT 191270 || | |||||||||||| || || | ||||| |||||||||| ||||| | Sbjct 7518 TCGTATCTGTATTCTTAATTTACCCTTTAGGTCAATCAGGTTGGTTCTTCGCACCAAGTT 7459 Query 191271 TTGGAGTTGCAGCAATCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTACAC 191330 |||| |||||||||||||| | | |||||||||| | || ||||||||||| || | Sbjct 7458 TTGGTGTTGCAGCAATCTTCCGTTTTATTCTATTCTTCCAGGGTTTCCACAACTGGACTC 7399 Query 191331 TCAACCCTTTCCACATGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGCCA 191390 | ||||| |||||||||||||| ||||| ||| || |||||| || ||| ||||||| | Sbjct 7398 TTAACCCATTCCACATGATGGGTGTTGCTGGTGTTTTAGGTGCTGCTTTATTATGTGCAA 7339 Query 191391 TTCATGGTGCTACAGTACAGAACACCTTGTATGAGGACTCAAGCATCTATACAGATGGTC 191450 |||| ||||| || ||| | ||||| || | || ||||||| Sbjct 7338 TTCACGGTGCAACTGTAGAAAACACATTATTCGA------------------AGATGGTG 7297 Query 191451 AAGTTCAAAGTACAACCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATTCTA 191510 | | | || || || | || || | |||||||| | ||| |||||||| || | Sbjct 7296 ATGGT---GCTAACACTTTCCGTGCTTTCAACCCAACACAAGCTGAAGAAACTTACTCAA 7240 Query 191511 TGATCACTGCAAACAGATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAAGAT 191570 || | ||||| |||||||||||||||||||| || ||| | || || |||||||| | | Sbjct 7239 TGGTAACTGCTAACAGATTCTGGTCACAGATTTTCGGTGTAGCTTTTGCTAACAAACGCT 7180 Query 191571 TTCTACACTTCTTGATGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAGGTA 191630 |||||||||| ||| | || || || || | || | |||| |||| || Sbjct 7179 GGTTACACTTCTTCATGCTATTCGTACCAGTTACTGGTCTTTGGATGAGTGCAATTGGGG 7120 Query 191631 TTGTAGGTCTTGCACTTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAGCAG 191690 | | || | || | ||| ||||||| ||||||||||| ||||| || || |||| | Sbjct 7119 TGATTGGCTTAGCTTTAAACCTAAGAGCCTATGATTTTGTTTCTCAGGAAATCCGAGCTG 7060 Query 191691 CAGAAGACCCAGAGTTTGAAACCTTCTATACTAAGAACATTCTTCTT-AATGAAGGTATG 191749 | ||||| || ||||||||||| |||||||| || || | |||| || ||||||||||| Sbjct 7059 CCGAAGATCCTGAGTTTGAAACATTCTATACAAAAAATA-TCTTATTAAATGAAGGTATT 7001 Query 191750 AGAGCATGGATGTCTTCAGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTT 191809 | || |||||| || | ||||||||| || || || || ||||| || ||||| Sbjct 7000 CGTGCGTGGATGGCTGCTCAAGACCAACCACACGAACGTTTAGTATTCCCTGAAGAAGTA 6941 Query 191810 CTACCTAGAGGAAATGCATTGTAAT 191834 ||||| | || || || | |||| Sbjct 6940 TTACCTCGTGGTAACGCTCTTTAAT 6916 Score = 210 bits (232), Expect = 3e-49 Identities = 194/246 (79%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 182486 ATGTCTCACGCCGTTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAAGGCT 182545 ||| |||| ||| ||||| ||||||||||| ||||| || || |||||||| ||| Sbjct 4848 ATGGCTCATATCGTAAAAATTTATGATACTTGTATTGGCTGTACTCAATGTGTACGTGCT 4907 Query 182546 TGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAATTGCT 182605 |||||||| || || |||||||||| |||||| |||| || |||||| ||||| ||| Sbjct 4908 TGTCCATTAGACGTTCTAGAAATGGTACCTTGGAATGGTTGTAAAGCAGCACAAATGGCT 4967 Query 182606 TCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCTACA 182665 || |||| | || || |||||||| || || || | |||||||| |||||||||||| Sbjct 4968 TCGGCACCGCGTACAGAAGATTGTGTTGGTTGCAAACGTTGTGAAACTGCATGTCCTACA 5027 Query 182666 GACTTTTTAAGTATTCGTGTTTACTTGGGTGCAGAAACCACAAGAAGCATGGGTCTAGCA 182725 ||||| |||||| ||||| ||||||| ||| | |||| |||||||| | ||| ||||| Sbjct 5028 GACTTCTTAAGTGTTCGTATTTACTTAGGTTCTGAAAGTACAAGAAGTTTAGGTTTAGCA 5087 Query 182726 TATTAA 182731 |||||| Sbjct 5088 TATTAA 5093 Score = 104 bits (114), Expect = 3e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 182846 TTAGCAAAAGGACCTAAAACAACCACATGGATATGGAATTTACACGCAGATGCTCATGAT 182905 ||||||||||| || || || || || ||||| ||||| |||||||| |||||||| || Sbjct 9056 TTAGCAAAAGGTCCAAACACTACAACTTGGATTTGGAACTTACACGCTGATGCTCACGAC 9115 Query 182906 TTTGATAAGCATTCTAGTGATCTGCAAGAGAATTCAAGAAAAATATTTGCTGCACACTTT 182965 ||||| | ||| | ||||| | |||| | ||||||||| |||| ||| |||||| Sbjct 9116 TTTGACAGCCATACAAGTGACTTAGAAGAAATCTCAAGAAAAGTATTCAGTGCTCACTTT 9175 Query 182966 GCTCATCTAGGTATCATCTT 182985 | ||| ||||||| || || Sbjct 9176 GGTCAATTAGGTATTATTTT 9195 >seq1667 Length=3906 Score = 414 bits (458), Expect = 1e-110 Identities = 741/1067 (69%), Gaps = 25/1067 (2%) Strand=Plus/Minus Query 186127 TGGTGCTTTTGCGCATGGAGCAATATTTTTTGTTAGAGACTTTGATCCTACTCTGAATAA 186186 |||||| ||||| ||||| || || || || | | |||| |||||| | || || Sbjct 3710 TGGTGCGTTTGCTCATGGTGCGATTTTCTTCATCCGTGACTACGATCCTGAACAAAACAA 3651 Query 186187 GGACAATGTTCTTGATAGAATGCTACAGCACAAAGAAGCAATTATAAGTCACTTAAGTTG 186246 | || ||| | | | || || | ||||||||||| ||||| ||||||||| || Sbjct 3650 AGGTAACGTTTTAGCACGTATTTTAGATCACAAAGAAGCTATTATTTCTCACTTAAGCTG 3591 Query 186247 GGTATCACTATTCCTTGGATTCCATACTTTAGGAATCTATGTCCATAATGATGTAGTAAT 186306 ||| || ||||| | || ||||| |||||||| | ||||| || || || |||||| Sbjct 3590 GGTTTCGTTATTCTTAGGTTTCCACACTTTAGGTTTATATGTTCACAACGACGTAGTACA 3531 Query 186307 GGCATTTGGTCATCCTGAGAGACAGATATTAATTGAACCTATATTTGCACAGTGGATACA 186366 || |||||| || || | ||| || |||||||||| | || ||||| ||||| || Sbjct 3530 AGCCTTTGGTACCCCAGAAAAACAAATTCTAATTGAACCAGTTTTCGCACAATGGATTCA 3471 Query 186367 GGCAGCATCA-GGTAAGATGATG-TATGGATTAAGTTTCTTACTATCTGATCCAAATAGT 186424 || || ||| ||||| || || ||||| || ||| ||| ||||| | |||| Sbjct 3470 AGCTGC-TCATGGTAA-ATCATTATATGGTTTTGATTTATTATTATCTTCATCGTCTAGT 3413 Query 186425 GCTGCAAGTCT-AGCAG--CAGAGAGTATGCCTGGTAATCATTACTGGATGAGTGCTATG 186481 ||||| ||| ||| | || || |||| || || | |||| | ||||| Sbjct 3412 GCTGCTT-TCTCAGCTGGTCAAAGCTTATGGCT-----TCCTGGCTGGTTAGAAGCTATT 3359 Query 186482 AATGATCAAACAAACAGTCTGT-TTCT-ACCAATAGGACCTGCTGATTTATTAGTTCATC 186539 || || | | || | ||| | |||| | |||| || |||| ||| || |||||||| | Sbjct 3358 AACAAT--AGCCAAAACTCTTTATTCTTAACAATTGGCCCTGGTGACTTCTTAGTTCACC 3301 Query 186540 ATGCTATTGCACTTGGATTACATACTACAACTTTAATCCTAGTCAAGGGTGCATTAGATG 186599 | ||||| || | || ||||| |||||||| ||||| || || || ||||| ||||||| Sbjct 3300 ACGCTATCGCGTTAGGTTTACACACTACAACATTAATTCTTGTAAAAGGTGCTTTAGATG 3241 Query 186600 CTAGAGGTTCAAAACTCATACCAGATAAGAAAGATTTAGGATATTCATTCCCTTGTGATG 186659 | | ||||||||| | || |||||||| ||||| || || || ||||||||||| | Sbjct 3240 CACGTGGTTCAAAATTAATGCCAGATAAAAAAGACTTTGGTTACAGCTTCCCTTGTGACG 3181 Query 186660 GTCCAGGCAGAGGTGGTACTTGTGATAGTTCTGGTTGGGATGCTTTCTATCTCTCTGTGT 186719 |||| || | |||||||||||||| | ||| | || ||||||||||| | | || | Sbjct 3180 GTCCTGGTCGTGGTGGTACTTGTGACATTTCAGCTTACGATGCTTTCTACTTAGCAGTAT 3121 Query 186720 TCTGGGCATTCAATACAATAGCATGGGCAGATTTTTATTGGCACTGGAAGAACCTTG--- 186776 ||||| | || || || | |||| | || || ||||||||||| || || Sbjct 3120 TCTGGATGCTTAACACTATTGGTTGGGTAACATTCTACTGGCACTGGAA--ACATTTAAC 3063 Query 186777 -CTAGTTGGCAAGGTAATCAGGCACAATTCAATACATCAGGAACATATCTTATGGGTTGG 186835 ||| ||||||||||| ||||| || || |||| ||| || | ||||||||| Sbjct 3062 ACTA--TGGCAAGGTAACGTTGCACAGTTTGATGAATCATCAACTTACTTAATGGGTTGG 3005 Query 186836 TTCAGAGATTATCTCTGGGCGAATAGTGCGCCTGTAATCACAGGGTACACACCATTTGGT 186895 || | || || | ||| || | | |||| | || |||| || || ||| Sbjct 3004 TTACGTGACTACTTATGGTTAAACTCATCACAATTAATTAACGGCTACAACCCGTTCGGT 2945 Query 186896 ATGAATAATCTCTCTGTATGGGCATGGATGTTCTTGTTTGGTCATTTAGTTTGGGCAACA 186955 ||||||| | ||||||||||| |||| ||||| |||||||| ||| | | || ||| Sbjct 2944 ATGAATAGCTTATCTGTATGGGCGTGGACATTCTTATTTGGTCACTTAATCTATGCTACA 2885 Query 186956 GGATTTATGTTCCTTATTTCTTGGAGAGGTTATTGGCAAGAGTTAATTGAGACTCTTGCT 187015 || || |||||| | || || ||| | ||||| |||||||| |||||||| || | | | Sbjct 2884 GGCTTCATGTTCTTAATCTCATGGCGTGGTTACTGGCAAGAATTAATTGAAACGTTAGTT 2825 Query 187016 TGGGCACATCAAAGAACTCCAATAGCAAATATAGCAGGTTGGAGAGATAAACCAGTGGCA 187075 |||||||| ||| ||||||| |||| || ||| ||||| ||| |||||||| || Sbjct 2824 TGGGCACACGAAAAAACTCCATTAGCTAACTTAGTTTATTGGAAAGACAAACCAGTTGCT 2765 Query 187076 CTTTCTATTGTTCAAGCAAGACTAGTTGGTTTATCACATTTTGCCATAGGATTTGTGCTT 187135 | || ||||||||||| | |||| |||||| | || || | | || | ||| || Sbjct 2764 TTATCAATTGTTCAAGCTCGTTTAGTAGGTTTAGCTCACTTCTCAGTTGGTTATGTATTT 2705 Query 187136 ACCTATGCACCATTCCTGATAGCAACAACAGCAAGTAGATACGGTTA 187182 || || || ||||| | || || |||| || || | | |||||| Sbjct 2704 ACTTACGCTGCATTCTTAATCGCTTCAACTTCAGGTCGTTTCGGTTA 2658 >seq1186 Length=9024 Score = 340 bits (376), Expect = 2e-88 Identities = 361/473 (76%), Gaps = 6/473 (1%) Strand=Plus/Minus Query 190187 AATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCATTA 190246 |||||| | |||||||||||||| ||| |||||| || ||| | |||||||| ||||| Sbjct 5907 AATATCTTAATGCACCCATTCCACATGTTAGGTGTTGCTGGTGTATTTGGTGGTTCATTA 5848 Query 190247 TTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTTTA 190306 ||||| || ||||| |||||| | ||||| |||||| ||||| | |||||||||| Sbjct 5847 TTCTCAGCTATGCACGGTTCATTAGTAACTTCTTCTTTAATCCGTGAAACAACTGAAAAC 5788 Query 190307 GAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAGCT 190366 || ||| ||| |||||||||||| || |||||||||||||| |||||||| |||||| Sbjct 5787 GAATCAGCTAACGCTGGTTACAAGTTCGGTCAAGAAGAAGAAACTTACAACATCGTAGCT 5728 Query 190367 GCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGT 190426 || || |||||||||||| | | |||||||| || ||||||||||||||||| | Sbjct 5727 GCACACGGTTACTTTGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTTCA 5668 Query 190427 TTACACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGTATT 190486 ||||||||||||||||| | | || || ||| | ||||| ||| | | ||| | Sbjct 5667 TTACACTTCTTCTTAGCTGCTTGGCCAGTTGTATGTATTTGGTTTACAGCTTTAGGTTTA 5608 Query 190487 TGCACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAA 190546 | || ||||| ||||||||||| || |||||||| |||||||| || || || | ||| Sbjct 5607 TCAACTATGGCTTTCAACTTAAACGGGTTCAACTTCAACCAGTCAGTTGTAGACTCTCAA 5548 Query 190547 GGTAAAATTGT-TCCAACA--TGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAA 190603 ||| ||| | |||| |||| || | | ||| | || ||| | |||||||| Sbjct 5547 GGT---CGTGTATTAAACACTTGGGCTGACATCATCAACCGTGCTAACTTAGGTATGGAG 5491 Query 190604 GTAATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCTTGTGCTGA 190656 |||||||||||| | || || ||||||||||| |||||| |||||| || ||| Sbjct 5490 GTAATGCATGAACGTAACGCTCACAACTTCCCTCTAGACTTAGCTTCTGTTGA 5438 Score = 264 bits (292), Expect = 1e-65 Identities = 678/1019 (67%), Gaps = 49/1019 (5%) Strand=Plus/Minus Query 183557 TTCTTCTCACTCAACTGGATGGCATTTACAGATTTCCTCACCTTTAAAGGTGGTTTGAAT 183616 ||||| || | ||||||| | || || |||||| | || |||||||||||||| || Sbjct 4140 TTCTTTACATTAAACTGGAGTGAATATAGCGATTTCTTAACATTTAAAGGTGGTTTAAAC 4081 Query 183617 CCTGTAACTGGCAGTCTTTGGATGACAGATATAGCACATCATCACCTAGCAATAGCAGTT 183676 |||||||| || || | ||| | ||||||| ||| || || ||| ||||||| || ||| Sbjct 4080 CCTGTAACAGGTGGTTTATGGTTAACAGATACAGCTCACCACCACTTAGCAATTGCTGTT 4021 Query 183677 ATGTTTATCATTGCAGGTCATATGTATCGCACAAACTGGGGTATTGGTCAATCAATGAAA 183736 | || | | || ||||| || || |||||||||||||||||||| || ||| Sbjct 4020 TTATTCTTAGTGGCTGGTCACCAATACCGTACAAACTGGGGTATTGGTCACAGTATCAAA 3961 Query 183737 GAGATATTAGATGGTCAGAATGG----TTTCCCACAGGGTGTCACACACAGAGGATTATA 183792 ||||| | || | || || || ||| ||||| || ||| || ||||| Sbjct 3960 GAGATCCTTGAGGCACATAAAGGACCATTT---ACAGG-TGAAGGTCACGTTGGTTTATA 3905 Query 183793 TGAATTTCTAGCAGAATCAAGACATGCACAACTATCACTGAATCTGGCAATGCTAGGATC 183852 ||| || || || | ||||||||| || | | || | ||| | | || || Sbjct 3904 CGAAATTTTAACAACTAGCTGGCATGCACAATTAGCTATTAACTTAGCATTATTTGGTTC 3845 Query 183853 --TATCAGTATCATAGTTTCACATCATATGTATGCAATGCCACCTTATCCATATCTTGGT 183910 ||||| ||||| ||| | || || ||||| ||||||| || || ||||| | | Sbjct 3844 ATTATCA--ATCATCGTTGCTCACCACATGTACTCAATGCCTCCATACCCATACTTAGCA 3787 Query 183911 ATTGAATATCCAAC--AGTAGTAGGATTATTCACCCATCATATGTGGATAGGTGGTTTTC 183968 | ||| ||| || ||| || | ||||||| || || |||||||| |||||||| Sbjct 3786 ACTGATTATGGTACTCAGT--TATCACTATTCACTCACCACATGTGGATTGGTGGTTTCT 3729 Query 183969 TTATTGTGGGTGCATCAGCACATGCTTCAATTGCTATGATAAGAGACTATAATCCTGTTC 184028 |||||| ||||| ||||| ||| | ||| ||| | | || || ||||| | Sbjct 3728 GTATTGTAGGTGCTGGTGCACACGCTGCTATTTTCATGGTTCGTGATTACGATCCTACTA 3669 Query 184029 AACA-TATGGGAAATGTATTAGATAGAATACTTAAATCTAGAGATGCAATCATCAGTCAC 184087 | | || || | ||||||| | || || | ||||| || || |||| Sbjct 3668 ATAACTACAATAACT-TATTAGACCGCGTAATTCGTCACCGTGATGCGATGATTTCTCAC 3610 Query 184088 TTGAACTGGGTATGCATCTTTTTAGGTTTTCATAGTTTTGGTCTTTATATTCACAATGAT 184147 || |||||||| || || || ||||| || || ||||||||| | || |||||||| ||| Sbjct 3609 TTAAACTGGGTTTGTATTTTCTTAGGCTTCCACAGTTTTGGTTTATACATTCACAACGAT 3550 Query 184148 ATTATGAGAGCATTGGGTAGACCTAATGATCTATTCAGTGATACAGCAATACAATTACAA 184207 | ||||| || || ||| | || | ||| | ||| |||||||| || ||| | ||| Sbjct 3549 ACGATGAGTGCTTTAGGTCGTCCACAAGATATGTTCTCGGATACAGCTATTCAACTTCAA 3490 Query 184208 CCTGTATTTGCACAGTCTGTTCAGAG-----ATTACAT-GCTTCATTATATAATGTCTCT 184261 || ||||||||||| | |||| | | | || ||| || | | || | Sbjct 3489 CCAGTATTTGCACAATGGATTCAAAATACGCACTTCACAGCTCCACAGTTAACTGCTCCA 3430 Query 184262 GATGTATTTGGTGGATCAACC---ACA----------ATG--------GTTGGTGGTAAG 184300 ||| ||| | || ||| | ||| ||| ||||| || || Sbjct 3429 AATGCATTAGCTGCTACAAGCTTAACATGGGGTGGTGATGTTGTTGCTGTTGGCGGGAAA 3370 Query 184301 ATTGCTAATGCTCCTTTTGTACT-AGGTACAGCAGACTTTATGATACATCACATACACGC 184359 | |||| || | | | | | | ||||||||| ||||| | | || || || || || Sbjct 3369 GTAGCTA-TGATGCCTATCTCTTTAGGTACAGCTGACTTCCTAGTTCACCATATCCATGC 3311 Query 184360 -TTTCCAGATTCATGTTTGTGTATTAATTCTTCTCAAGGGTGTTTTATACTCTAGAAACT 184418 ||| || || |||||| ||| |||||||| | || |||||||||||| | | | | Sbjct 3310 ATTTACA-ATCCATGTTACTGTTTTAATTCTATTAAAAGGTGTTTTATACGCGCGTAGTT 3252 Query 184419 CACAATTAATACCAGATAAGAGTAAGTTAGGATTCAGATTCCCTTGTGATGGTCCTGGTA 184478 | | ||||| || ||||| || ||||| ||| | ||||||||||| ||||||||| Sbjct 3251 CTCGTTTAATCCCTGATAAAGCGAATTTAGGTTTCCGTTTCCCTTGTGACGGTCCTGGTC 3192 Query 184479 GAGGAGGCACTTGTCAGGTATCAGGATGGGATCATGTATTCCTTGGTTTATTCTGGATG 184537 | || || |||||||| || |||| ||||| || || ||| | || || ||||||||| Sbjct 3191 GTGGCGGTACTTGTCAAGTTTCAGCTTGGGACCACGTGTTCTTAGGCTTGTTCTGGATG 3133 Score = 203 bits (224), Expect = 4e-47 Identities = 272/376 (72%), Gaps = 2/376 (1%) Strand=Plus/Minus Query 189656 TGGCCTCAGTTCTGTGAGTGGGTAACATCAACAAACAATAGAATCTATGTTGGTTGGTTT 189715 ||| ||| ||||| |||||| | || || || | || | | || | |||||||| Sbjct 8831 TGGGCTCGTTTCTGCGAGTGGATCACTTCTACTGAGAACCGTTTATACATCGGTTGGTTC 8772 Query 189716 GGTGTACTCATGATTCCATGCT-TGCTCGCAGCAGCAGCATGCTTCGTTGTTGCATTTAT 189774 ||||| ||||||| || | || | | |||| | | ||| | | ||||| || Sbjct 8771 GGTGTTATCATGATCCC-TACTCTTTTAACAGCTACTTCTGTATTCATCATCGCATTCAT 8713 Query 189775 TGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAGGTTCACTTCTCTA 189834 || || || ||||| ||||| ||||| ||| | ||||||||| | |||||| | | || Sbjct 8712 CGCTGCTCCTCCTGTTGACATCGATGGTATCCGTGAGCCAGTTTCTGGTTCATTATTATA 8653 Query 189835 TGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTATTGGTCTACACTT 189894 |||||||||||||| ||||||||||| | ||| |||| || || || ||| ||||||| Sbjct 8652 CGGTAACAACATCATCACTGGTGCTGTTATCCCTACATCTAACGCGATCGGTTTACACTT 8593 Query 189895 CTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTGGCTTTACAATGGTGGTCCTTACCA 189954 ||||||||| ||||||||||| | | || |||||| | ||||| |||||||||||||| Sbjct 8592 CTACCCAATTTGGGAAGCAGCTTCTCTTGACGAGTGGTTATACAACGGTGGTCCTTACCA 8533 Query 189955 GTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGACAGTGGGAATT 190014 || | | | ||||||| | | ||||||| |||||||| | |||||||||| Sbjct 8532 ATTAATCGTTTGCCACTTCTTCTTAGGTATCTGCTGTTACATGGGCCGTGAGTGGGAATT 8473 Query 190015 ATCATACAGACTAGGT 190030 ||| | | | ||||| Sbjct 8472 ATCTTTCCGTTTAGGT 8457 Score = 179 bits (198), Expect = 5e-40 Identities = 249/345 (72%), Gaps = 4/345 (1%) Strand=Plus/Minus Query 184602 CAGGAGGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTTGAGAGACTTCTTAT 184661 |||| |||||||||| ||| || | | |||||||| || ||||| | |||||||||| Sbjct 669 CAGGTGGTAACTTTGGTCAAAGCGCTAACACAATCAACGGTTGGTTACGTGACTTCTTAT 610 Query 184662 GGTCACAGTCAAGTCAAGTTCTCAATAGTTATGGA-CAAGAC-ATCAGCATGTATGGTTT 184719 || |||| ||||| |||||| || | || || | | |||||| ||||||||| Sbjct 609 GGGCACAATCAAGCCAAGTTATCCAATCATACGGTTCTTCATTATCAGC--GTATGGTTT 552 Query 184720 GCTATTTCTTGGAGCACATTTTGTATGGGCATTCAGTTTGATGTTCCTATGGAGTGGTAG 184779 | || | || || || || || ||||| ||| | |||||| ||| |||| | Sbjct 551 AATGTTCTTAGGTGCTCACTTCGTTTGGGCTTTCTCACTTATGTTCTTATTCTCTGGTCG 492 Query 184780 AGGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAACAAATTAAAACTTGC 184839 || |||||||||||| | || || || |||| ||||| || |||||| | ||| | || Sbjct 491 TGGTTACTGGCAAGAGCTTATTGAATCAATTGTATGGGCCCACAACAAACTTAAAGTGGC 432 Query 184840 ACCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGCTGTTGGAGTTGCACA 184899 ||| | || || ||| | || | ||||| ||||| ||||||||||| || || || Sbjct 431 TCCTTCTATCCAGCCACGTGCTTTAAGTATTACTCAAGGTCGTGCTGTTGGTGTAGCTCA 372 Query 184900 CTTCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGC 184944 || |||| | || |||||||| ||||||||| | |||||||| || Sbjct 371 CTACTTATTAGGTGGTATTGCTACAACATGGTCGTTCTTCTTAGC 327 Score = 98.7 bits (108), Expect = 1e-15 Identities = 89/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 190031 ATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATTC 190090 ||| | || |||||| ||||||||| || || |||||| |||| ||| ||| |||||| Sbjct 8169 ATGCGTCCATGGATCGCTGTTGCTTACTCTGCTCCAGTAGCTGCTGCAACTGCTGTATTC 8110 Query 190091 CTTGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATGCCTTTAGGTA 190142 | | ||||| | ||||| ||||| |||||||| |||||||||||||||| Sbjct 8109 ATCATCTACCCTATCGGTCAAGGTTCTTTCTCTGACGGTATGCCTTTAGGTA 8058 >seq1410 Length=5958 Score = 324 bits (358), Expect = 2e-83 Identities = 758/1134 (67%), Gaps = 20/1134 (2%) Strand=Plus/Minus Query 184987 ATTTCCAAAATTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAGATTGTGGTATGG 185046 |||||| ||||||| |||| | | ||| ||||| | ||| | | | |||| || Sbjct 5491 ATTTCCTAAATTTAGCCAAGGTCTAGCACAAGATCCAAGTACTCGTCGTATTTGGTTCGG 5432 Query 185047 ATTAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGTTATATCA 185106 | || ||||||||||| || ||||||||| |||||||||||| || | || || Sbjct 5431 TCTTGCTGTAGCACATGACTTCGAAAGTCATGACGGTATGACAGAAGAAAATCTTTACCA 5372 Query 185107 AAAATTATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGCAGGTAA 185166 ||| | ||||| | ||||||||||| | || | || || |||||| | ||||| Sbjct 5371 AAAGATTTTTGCATCTCACTTTGGTCAATTAGCTGTAATTTTCCTATGGACATCTGGTAA 5312 Query 185167 TTTAATTCATATAGCATGGCAAGGTAACTTTGAACAGTTTGTAGCAGACCCACAACATGT 185226 ||| | || |||| |||||||||||||||||||| | ||| |||| ||| || || Sbjct 5311 CTTATTCCACGTAGCTTGGCAAGGTAACTTTGAACAATGGGTAACAGATCCAGTTCACGT 5252 Query 185227 GATACCTATAGCACATAGAATATGGGATCCTCATTTTGGTCAAGGTGCAACAGATGCATA 185286 || || || || ||| |||||||| || ||||||||| |||| |||||| | Sbjct 5251 TCGCCCAATTGCTCACGCAATCTGGGATCCACACTTTGGTCAACCTGCAGTAGATGCTTT 5192 Query 185287 CACACAGGCAGGTTCTACTTTTCCTGTGAACAGATTGTATTCTGGACTGTATCATTGGTG 185346 ||||| | || || | ||| || |||| | |||||| | || || ||||| Sbjct 5191 CACACGTGGTGGCGCTTCAGGTCCAGTAAACATTTCAACTTCTGGTGTTTACCAATGGTG 5132 Query 185347 GTACACAGTTGGTATGAGAACTAATATGCAACTGTATACTGGTGGTGCATT--TATGATT 185404 ||||||| ||||| | | |||| |||| ||| ||| || || || ||| Sbjct 5131 GTACACAATTGGTTTACGTTCTAACCAAGAACTATATGTAGGTTCTGTTTTCCTAGCATT 5072 Query 185405 CTACTAGCATTGGTATCTTTACTTGGTGCTCAATTACATCTGAAACCAAAGTTTGCACCT 185464 | || || || | ||| ||| || ||||| | |||| || ||| || | Sbjct 5071 --AGTATCAGCAGTTTTCTTATTTGCTGGCTGGTTACACTTACAACCTAA-TTTCCAACC 5015 Query 185465 AAGCTTG-CTTGGTTTAAAGATAATGAGAACAGATTAAATCATCATCTATCAGTTCTATT 185523 | || | ||||| |||||| |||| | ||||| || || |||| | | |||| Sbjct 5014 ATCTTTATCATGGTTCAAAGATGCTGAGTCACGTTTAAACCACCACTTATCTGGTTTATT 4955 Query 185524 TGGATTCAGTTCTATTGCATGGGCTGGTCATTTGATACACGTAGCAATACCTGCATCAAG 185583 ||| | || ||| | || ||| | || || || || ||||| || || || | |||| | Sbjct 4954 TGGTGTAAGCTCTTTAGCTTGGACAGGACACTTAATTCACGTTGCTATCCCAGAATCACG 4895 Query 185584 AGGA-ATCACTGTAGATTGGACTAA----TTATGTGTTTATGAAACCTCATCCTGCAGGT 185638 || | || ||| | |||| ||| |||| |||| ||| || || |||| Sbjct 4894 TGGTCAACA-TGTTGGTTGGGATAACTTCTTATCAGTTTT----ACCACACCCACAAGGT 4840 Query 185639 TTACTGCCATTCTTTACAGGAAACTGGGGTGTTTATGCACAAAATCCTGATGGA--TTAA 185696 ||| ||||||| |||| ||||||| || |||||||||||| || ||| | || | Sbjct 4839 TTAGCACCATTCTGGTCAGGTAACTGGGCTGCTTATGCACAAAACCCAGATACAGCTTCA 4780 Query 185697 ATCAAATATTCAATACAACAGAGGGTTCTGGAACAGCAATATTAACATTCATGGGTGGTT 185756 || |||| | ||| |||| ||||| || || || || ||||| ||| | || |||| Sbjct 4779 --CACGTATTTAGTACTGCAGAAGGTTCAGGTACTGCGATTTTAACGTTCTTAGGCGGTT 4722 Query 185757 TCCATCCACAAACAGAGGCATTATGGTTGACTGATATAGCACATCATCACCTTGCAATAG 185816 |||| ||||||||| | |||||||| || ||||| || || || ||| | ||||| | Sbjct 4721 TCCACCCACAAACACAAAGTTTATGGTTAACAGATATGGCTCACCACCACTTAGCAATCG 4662 Query 185817 GAGTAATATTCATTATTGCAGGTCATATGTATAGAAGTGCTTGGGGTATTGGTCACTCAA 185876 || || |||||| |||||||||| ||||| | | | | |||||||||||| Sbjct 4661 CGGTTATTTTCATTGTTGCAGGTCACATGTACCGTACTAACTTTGGTATTGGTCACCGTT 4602 Query 185877 TGAAGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTGCAGGTCATAAAG 185936 | | | ||| | || || || || | ||||| || | ||||||| ||||| |||| Sbjct 4601 TACAAGCGATTTTAGATGCGCACACTGCTCCAAGTGGTCGTTTAGGTGCGGGTCACAAAG 4542 Query 185937 GATTATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTGCACTTGCATCTC 185996 | | | ||| ||||| | |||| |||||| | || |||||| | || | || ||| Sbjct 4541 GTATTTTTGATACAGTAAACAACTCTTTACACTTCCAATTAGGTTTAGCGTTAGCTTCTG 4482 Query 185997 TAGGTGTTGTTACTAGTCTGGTGGCACAACATATGTACTCAATGCCATCCTATGCTTTCA 186056 ||||| | || || | || ||||| || ||||| | ||| | || |||| Sbjct 4481 TAGGTACAATCACATCAATGATTGCTCAACACATTTACTCTTTACCACCATACGCTTATT 4422 Query 186057 TAGCACAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAATACATTG 186110 |||| | ||| || |||||||| |||| || |||||||| |||| Sbjct 4421 TAGCTATTGACTTTACAACACAAGCTGCATTATACACACACCATCAATATATTG 4368 Score = 84.2 bits (92), Expect = 3e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 183629 AGTCTTTGGATGACAGATATAGCACATCATCACCTAGCAATAGCAGTTATGTTTATCATT 183688 ||| | ||| | |||||||| || || || ||| ||||||| || ||||| || || || Sbjct 4704 AGTTTATGGTTAACAGATATGGCTCACCACCACTTAGCAATCGCGGTTATTTTCATTGTT 4645 Query 183689 GCAGGTCATATGTATCGCACAAACTGGGGTATTGGTCAATCAATGAAAGAGATATTAGAT 183748 |||||||| ||||| || || |||| ||||||||||| | ||| ||| |||||| Sbjct 4644 GCAGGTCACATGTACCGTACTAACTTTGGTATTGGTCACCGTTTACAAGCGATTTTAGAT 4585 Query 183749 G 183749 | Sbjct 4584 G 4584 >seq681 Length=27805 Score = 131 bits (144), Expect = 2e-25 Identities = 133/173 (77%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 190197 TGCACCCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCATTATTCTCTGCAA 190256 ||| | | ||||| ||| |||||| || ||| | || ||||| |||||||||||||| Sbjct 3261 TGCTCACGTTCCACATGTTAGGTGTTGCTGGTGTTTTCGGTGGTTCATTATTCTCTGCAT 3202 Query 190257 TGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTTTAGAGTCACAGA 190316 |||| |||||| | ||||| |||||| ||||| | |||||||||| | || ||| | Sbjct 3201 TGCACGGTTCATTAGTAACTTCTTCTTTAATCCGTGAAACAACTGATAACGAATCAGCTA 3142 Query 190317 ACTATGGTTACAAGTTTGGACAAGAAGA----AGAAACATACAACATAGTAGC 190365 || |||||||||||| || ||||| || |||||| |||||||| ||||| Sbjct 3141 ACGCTGGTTACAAGTTCGGTCAAGAGGAACGTAGAAACTTACAACATCGTAGC 3089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631407207436280