Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6 102 1e-16 seq7 82.4 9e-11 >seq6 Length=466235 Score = 102 bits (112), Expect = 1e-16 Identities = 99/126 (79%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 || |||| |||| || || || ||||||||||| |||||||||||||| ||||| ||| Sbjct 151974 TGTGCGATCATGAGCGTGAGGAGCGAGTAGCTGGCAATGTTGAAGGGCACGCCCAGGCCC 152033 Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGG 145881 | ||| | ||||||||||||| | |||| ||||| ||| | ||||||||||| | Sbjct 152034 ACGTCGCAGGAGCGCTGGTACATCATGCAGTGCAGCTCGCCGTCACTCACGTAGAACT-G 152092 Query 145882 CACAGG 145887 |||||| Sbjct 152093 CACAGG 152098 >seq7 Length=463579 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 36802 GGGTTCTACAACACCCCGGTGCTGGTGGTGGACTTTGCCAGCCTGTACCCCACCATCATC 36861 ||||||||| | | |||||| | ||||||||||| ||||||||| ||||||| Sbjct 120126 GGGTTCTACGAGAAGCCGGTGGCCACGCTGGACTTTGCCTCGCTGTACCCCTCCATCATG 120067 Query 36862 CAGGCCCACAACCTCTGCTACTCCACCATGATCCCCGGAGACAGG 36906 ||| ||||||||||||||| |||| || ||||| ||||||| Sbjct 120066 ATGGCGCACAACCTCTGCTACACCACGCTGCTCCCCACAGACAGG 120022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590046543812080