Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 4e-12 >seq2 Length=533353 Score = 87.8 bits (96), Expect = 4e-12 Identities = 121/169 (72%), Gaps = 3/169 (2%) Strand=Plus/Minus Query 249240 CAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGT 249296 ||||| | | |||||| ||| || || ||||| ||||||||||||| | || Sbjct 428783 CAGGTACGTGGACCAGGGCGGCGGCAAGCGCAAGGGCGCGTTCGCCATGTACATTGAGCC 428724 Query 249297 GTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCAT 249356 |||||| | || | || || ||||| ||| || |||||| ||||||| ||| Sbjct 428723 CTGGCACTCTGACGTGTTTGACTTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGC 428664 Query 249357 GAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405 | | ||||| ||||||||||||| |||||| || ||||| | |||||| Sbjct 428663 GCGCGCGCGCGACCTCTTCTACGCGCTGTGGATCCCCGACCTATTCATG 428615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073709966193536