Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 1e-14 >seq6 Length=466235 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/139 (76%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 29878 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGC 29937 || || || |||||| ||||||||| ||||||||||| ||||| ||||| || || || Sbjct 151971 ACCTGTGCGATCATGAGCGTGAGGAGCGAGTAGCTGGCAATGTTGAAGGGCACGCCCAGG 152030 Query 29938 CCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAAC 29997 |||| ||| | || | |||||| | | || ||||| ||||| |||||||| ||| Sbjct 152031 CCCACGTCGCAGGAGCGCTGGTACATCATGCAGTGCAGCTCGCCGTCACTCACGTAGAAC 152090 Query 29998 TGACACATGGTGTGGCACG 30016 || |||| |||| |||||| Sbjct 152091 TG-CACA-GGTGAGGCACG 152107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408597171929246