Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq6 102 1e-16 >seq6 Length=466235 Score = 102 bits (112), Expect = 1e-16 Identities = 108/140 (77%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 146994 CACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAG 147053 ||| || || | |||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct 151970 CACCTGTGCGATCATGAGCGTGAGGAGCGAGTAGCTGGCAATGTTGAAGGGCACGCCCAG 152029 Query 147054 GCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAA 147113 ||||| ||| | || | |||||||| | ||| ||||| ||||| |||||| || Sbjct 152030 GCCCACGTCGCAGGAGCGCTGGTACATCATGCAGTGCAGCTCGCCGTCACTCACGTAGAA 152089 Query 147114 CTGGCACAGGATGTGGCACG 147133 || ||||||| || |||||| Sbjct 152090 CT-GCACAGG-TGAGGCACG 152107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583458081652800