Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1341 102 3e-16 >seq1341 Length=23566 Score = 102 bits (112), Expect = 3e-16 Identities = 129/176 (73%), Gaps = 1/176 (1%) Strand=Plus/Minus Query 443698 GCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCT 443757 |||||| |||||| || || || ||||| | ||| || || | || || |||||| | Sbjct 13953 GCTTCGCCGAGCGCCTGGTGGCGTTTGCGGCGGTTGAGGGCATCTTCTTCAGCGGCTCGT 13894 Query 443758 TTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAAC 443817 | || |||||||||||| | || ||||| || || |||| ||| || ||||| ||| Sbjct 13893 TCTGC-TCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGGCTTACCTTCTCCAAC 13835 Query 443818 GAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACAC 443873 || || ||| || |||||||| |||| |||||||| ||||| | || ||||| Sbjct 13834 GAGCTCATCTCGCGTGACGAGGGCATGCACTGCGACTTTGCCTGCTTGCTATACAC 13779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588252522023390