Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq135 192 6e-44 seq2 159 4e-34 seq1341 105 7e-18 seq5 100 3e-16 >seq135 Length=196152 Score = 192 bits (212), Expect = 6e-44 Identities = 504/758 (66%), Gaps = 16/758 (2%) Strand=Plus/Minus Query 79056 CGATGCCAGGTTGCACACGGC---CGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGT 79112 ||| || |||||||| || || ||| | | || || || | |||| ||||||| | Sbjct 154743 CGACGCTAGGTTGCATACCGCATACGTATGTT--GGTCT-GAGAACTCGGTGATTTCGGC 154687 Query 79113 GCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGC 79172 |||| || |||||||| ||||| | |||| ||||||||||| ||| | Sbjct 154686 ACACAGGTTGCTGGACTTGATTGTGCCCACGTTCGCGTGGTTGCTCTTGCGGTTGACGTG 154627 Query 79173 GTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCA 79232 ||||||||| ||||| ||||| || || || | | |||||||| ||| | ||| Sbjct 154626 GTCCTTGTATAGGATGTAGGGCGTGCCAGTTTCGATGAGGCTCTTGAGGACGTGCTGCCA 154567 Query 79233 GATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTA-CGTCCGGTACA 79291 | | || ||| | | | || || | ||| || ||||| || || || | Sbjct 154566 CAGGGTGCGTGCCGGAAGGCGGCGCGTGAACTGGCCCGCGGCCACGTATCGGGCG-TAGA 154508 Query 79292 ACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGC-ACATC 79350 | | | || || ||| | | || | ||||| ||||| || ||||| |||| Sbjct 154507 GCGCTGTAAACGCAGGCCCCACGGCGTCAGTGAGGCCTGGGCAGCGGT-CGGGCGACATG 154449 Query 79351 AGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCC 79410 ||| |||||||||||| | | || |||||| ||| || | |||||| ||| Sbjct 154448 AGGAACCAGTCCTCGTCGTCATGCACGCGGCGCATGAACTCGTCGGGCACCCACAGTGCC 154389 Query 79411 GTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAG 79470 |||||||||||| ||| | |||| |||| |||| | || | ||| | ||| Sbjct 154388 AGGAAGAGGTCGCGCGTCCGCTCCGTCTCGGCGCCTGTGTTCTGTCGTAACTCCACAAAC 154329 Query 79471 TCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCG 79530 ||| | |||||||||||| ||||||| || | |||| ||| ||||||||||||| Sbjct 154328 TCCCACACGTCGGCGTGCCATGGCTCCAAGTACACCGCGATCGAGCCCTTGCGCTTGC-- 154271 Query 79531 CCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCG 79590 ||| |||||| ||||| || || | |||||| || ||||||||||||||||||| Sbjct 154270 CCG-ATTGGTTGCAATACCGTGCGGTCTCGTTGAACACCTTGAGCATGGGCACGATGCCG 154212 Query 79591 TCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGG 79650 |||| |||||| || | |||| || | || | || || ||||| | ||| Sbjct 154211 TCGGACCGGCCGTTGGTGCTCATGATGCGCGAGCCCTTGGCACGGATGTTGCTGACGTGC 154152 Query 79651 ATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATG 79710 | |||||||| || | ||||||||||||| |||| | || | || | | |||| Sbjct 154151 ACACCGATGCCGCCAGCCCACTTGGAGATGCGCGCACTGTCGGATATGGTTTTGAAGATA 154092 Query 79711 CCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTC 79770 || ||||| | ||| | | | | | ||| ||||| ||||||||| || | Sbjct 154091 CCATCGAT---GCTGTCGTGCGTGCCCAGCAGAAAGCACGACGACATCTGCTCGTGCCGC 154035 Query 79771 GTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAA 79808 || || ||||| ||||| ||||| | |||||||| || Sbjct 154034 GTGCCTGCGTTAAAGAGCGTCGGGCTGGCGTGCGTAAA 153997 Score = 167 bits (184), Expect = 3e-36 Identities = 466/709 (66%), Gaps = 12/709 (2%) Strand=Plus/Plus Query 19196 TTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGC 19255 || |||||||| | ||||| || || ||||| || ||| || |||||||||| Sbjct 153997 TTTACGCACGCCAGCCCGACGCTCTTTAACGCAGGCACGCGGCACGAGCAGATGTCGTCG 154056 Query 19256 TGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAG 19315 || || || ||| | | | || |||||| || || |||| | | || | || Sbjct 154057 TGCTTTCTGCTGGGCACGCACGA---CAGCATCGATGGTATCTTCAAAACCATATCCGAC 154113 Query 19316 TGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCACTGCTCGAATATCCGGTCG 19375 | |||| ||||||||||||| | || || ||||| | ||| | || ||||| | Sbjct 154114 AGTGCGCGCATCTCCAAGTGGGCTGGCGGCATCGGTGTGCACGTCAGCAACATCCGTGCC 154173 Query 19376 AGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGC 19435 | || | || |||| | || ||||| ||||||| ||||| || |||||| Sbjct 154174 AAGGGCTCGCGCATCATGAGCACCAACGGCCGGTCCGACGGCATCGTGCCCATGCTCAAG 154233 Query 19436 GTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTC 19495 || |||||| | || || |||| |||||| |||| || |||||||||||| || Sbjct 154234 GTGTTCAACGAGACCGCACGGTATTGCAACCAATCGGGC---AAGCGCAAGGGCTCGATC 154290 Query 19496 GCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAAC 19555 || | ||| | |||||||||||||| ||||| ||| || | || | || | |||| Sbjct 154291 GCGGTGTACTTGGAGCCATGGCACGCCGACGTGTGGGAGTTTGTGGAGTTACGACAGAAC 154350 Query 19556 CAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTA 19615 || | |||| | ||| |||||||||||| ||| ||||| | || ||| Sbjct 154351 ACAGGCGCCGAGACGGAGCGGACGCGCGACCTCTTCCTGGCACTGTGGGTGCCCGACGAG 154410 Query 19616 TTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGT-GCCCGCACGAATGCCC 19674 |||||| || | | ||||| || ||| ||| |||| ||||| || ||||| Sbjct 154411 TTCATGCGCCGCGTGCATGACGACGAGGACTGGTTCCTCATGTCGCCCG-ACCGCTGCCC 154469 Query 19675 TGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTA--CCGGACTTACGTAGCC 19732 ||||| | |||| | || ||||| | | | | || || || ||||| ||| Sbjct 154470 AGGCCTCACTGACGCCGTGGGGCCTGCGTTTACAGCGCTCTACGCCCGA--TACGTGGCC 154527 Query 19733 CAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGC 19792 ||||| ||||| | | | ||| || | | ||| | | ||||||||| ||| Sbjct 154528 GCGGGCCAGTTCACGCGCCGCCTTCCGGCACGCACCCTGTGGCAGCACGTCCTCAAGAGC 154587 Query 19793 CAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAAT 19852 | |||| || ||||| || ||||| ||||||||| || ||| |||| || Sbjct 154588 CTCATCGAAACTGGCACGCCCTACATCCTATACAAGGACCACGTCAACCGCAAGAGCAAC 154647 Query 19853 CAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCA 19901 || |||| | ||| | |||||||| |||||||||| | ||||||| Sbjct 154648 CACGCGAACGTGGGCACAATCAAGTCCAGCAACCTGTGTGCCGAAATCA 154696 Score = 134 bits (148), Expect = 2e-26 Identities = 352/527 (67%), Gaps = 9/527 (2%) Strand=Plus/Minus Query 46195 ACCGACCCGGAGTTGTCCTTCCAGTTCGGCACCTCATTTCCGCCCAGGATTCCAGGCGTC 46254 ||||| || | |||||| |||||| ||| |||| || || |||| | |||||| | Sbjct 39438 ACCGAGCCAGCGTTGTCTACCCAGTTTGGCGCCTCGTTGCCTGCCAGCACCCCAGGCACC 39379 Query 46255 TTCCAC--TGGAAGC-TCAGGGCCGTCTCATTCTTACGCGCGATC-GACACGTCCTCTCC 46310 ||||| ||| ||| || |||| ||| | ||| |||| | || | ||||||| Sbjct 39378 TTCCAGCATGGCAGCGTCTCGGCCTTCTTGTACTTGATGTTGATCTGGCATG-CCTCTCC 39320 Query 46311 TGAGACGAGCGACTGAAACTCGGCCTGCTCGAGAGCCAGGTCGCCCTTGATCTCCGGGCT 46370 ||| |||| ||| |||||||| ||||| | |||||| |||||||| || ||| Sbjct 39319 TGACACGACGCTCTGGAACTCGGCTTGCTCCATCTGCAGGTCCCCCTTGATTTCTGGGGC 39260 Query 46371 GATGAACATGAACCCC-CTGTAGATGCTCGAGAGGCCGAATTTCTTCTCGATATTGTTCG 46429 || ||||| || | | ||| ||| ||| |||||||| || |||||| ||||| | Sbjct 39259 GACGAACAGGAGCTTCTCTGC-GATCGCCGACAGGCCGAACTTGCGCTCGATGTTGTTAG 39201 Query 46430 AAAGCGTCGAGACGTCCTCGCATTCGTAAAACTTGCGGGCAACCTTGG-TGATGAGGGTC 46488 | || ||||| ||| ||| |||| ||| | || | | ||| ||| ||| Sbjct 39200 AGAGGACACCCACGTCTTCGGGCTCGAAAAAGTTG-GCACAGACGCGCATGAGGAGCGTC 39142 Query 46489 GACTTGCCCGAGCGCGCGATACCCTTCAGGAACGGGATCACCTGCCAACCGTCCATCTCG 46548 |||||||||| || ||| || || | ||| ||||| |||||||| | ||| | || Sbjct 39141 GACTTGCCCGTGCCGGCGTGGCCTTTGAAGAAAGGGATGACCTGCCATGCATCCTTGTCT 39082 Query 46549 TTCACGTCGAAACACAACCGTCCCATGAAAACGTAGGTCCAGCGGCAAACATCCTCCTCG 46608 || || | ||| || || | ||| ||||| ||| ||||| || || ||| Sbjct 39081 CCGACCTCATACAACAGGCGGCCAACGAAGACGTACAGCCATCGGCAGACGTCGGGTTCG 39022 Query 46609 AATCGCTGGTAGTCCAGGACGCTCTGCATGTGAGGCGTCGGAATGTTGTACCAGTCTGCG 46668 || | |||| || || | ||||| ||| ||||| | || | ||||||||| || Sbjct 39021 AACCCTTGGTGCAGCATGATGGACTGCAGGTGCGGCGTTGCGATATCGTACCAGTCCACG 38962 Query 46669 ATGTCCCCGTAAGGGTCGAATTCCTGATCGAAATACTTGCACGAGAC 46715 | | || | | ||||| ||| ||||| |||||||| | ||| Sbjct 38961 ACGCCCACATGGTCATCGAAGTCCATGTCGAAGTACTTGCATGCGAC 38915 Score = 116 bits (128), Expect = 4e-21 Identities = 206/298 (69%), Gaps = 2/298 (1%) Strand=Plus/Plus Query 134150 GTTCCAGCGTCGCATGCTGATCGCCTGCGTGACTGGTCTGGAGTTCCTGAACGACAAATT 134209 |||||| || |||||||| || || |||||| || | |||||| |||||| | || Sbjct 137345 GTTCCAACGCCGCATGCTCATGGCATGCGTGCACGGCATCGAGTTCTTGAACGGCCGCTT 137404 Query 134210 CGACCCGTTCGACCTGGAATTGAACGGCTGGTCCCAGAACGCCATGGAGAACGTCGAGGA 134269 |||||| || ||| | | || |||||||||| | | | | |||||| | || || Sbjct 137405 CGACCCTTTTGACGTCAAGCTGGACGGCTGGTCGGACAGCATCCACGAGAACCTGGACGA 137464 Query 134270 CTACGATGGAGTCTTTGAAGAGCTGTATAACAAGTACAA-GACGAAGGTACAGGTCGCAC 134328 |||||| | || || || |||||| || ||||||| | | ||| | || | || | Sbjct 137465 CTACGACGACGTGTTCGAGGAGCTGCATGTCAAGTACCGCGGCAAAGCCA-AGATGGCGC 137523 Query 134329 CCGAGGTCAAGCTGATTATGATGGTCGGCGGCTCGGCAATGATGTTCCATCTGACGAACA 134388 ||||| | ||||| | | ||||| |||||||| ||| ||||||||||| | || |||| Sbjct 137524 CCGAGCTGAAGCTCCTCTTCATGGTGGGCGGCTCCGCAGTGATGTTCCATGTCACTAACA 137583 Query 134389 GCATGTTCAAGGCGGCCGTGCCGAACGTGAACCAGGTGATGCAGCAGAACCCCGAGCT 134446 ||| | || || | || | || | ||| | | | |||||||||||||| Sbjct 137584 CGATGCTGAAACACGCGCTTCCCGGCATGGATCAGATCCTCAAACAGAACCCCGAGCT 137641 Score = 98.7 bits (108), Expect = 1e-15 Identities = 123/166 (74%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 59966 AGCATCATTTGCACAACGTCTCATAGC-TTTTGCATGCGTGGAAGGAATCTTCTTCTCTG 60024 ||| || ||||| || || ||| | || |||||||| |||||| || |||||||||||| Sbjct 159499 AGCGTCGTTTGCGCAGCGGCTCGTCGCGTTTTGCAT-CGTGGAGGGCCTCTTCTTCTCTG 159557 Query 60025 GCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCT 60084 || ||||||| || || | |||| ||||| |||| ||| |||| || |||| | Sbjct 159558 GCGCGTTCTGCGCGATCTACTGGATCAAACAGCGCAACCTGCTGCCCGGGCTGACCAAGT 159617 Query 60085 CCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGC 60130 |||||||| | || | || ||||||||| | || | ||||||| Sbjct 159618 CCAACGAGTTTATCGCACGCGACGAGGGCATGCACACGCAGTTTGC 159663 >seq2 Length=533353 Score = 159 bits (176), Expect = 4e-34 Identities = 251/358 (70%), Gaps = 6/358 (2%) Strand=Plus/Minus Query 20460 CCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGG 20519 ||||||||||| |||| || ||| ||| |||||| |||| ||| |||||||| Sbjct 425679 CCAACATCTACGTGCGCCGCGTGCTGAGCGGGGAGTTCACAGTGGTGAACCAGCACCTGC 425620 Query 20520 TCCGCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAATTGTCCGAG 20579 | | |||| | | || | ||||| ||||| | ||||| || | || | Sbjct 425619 TGCACGACCTCTCGCGCATGGGCGTGTGGAGCCCCAACGTCAAGAACGAGCTGGTGGCGG 425560 Query 20580 CCGGCGGGAGCGTCCAGGCATTGGATATCCCCCAGAACCTCAAGGACATTTACAGGACCG 20639 || ||| ||||| |||| |||| |||||| | ||||| |||| | |||| ||| | Sbjct 425559 CCAACGGCAGCGTGCAGGAGCTGGACATCCCCGACAACCTAAAGGCGCTCTACAAGACGG 425500 Query 20640 TATGGGAAATCCCACAGAAGAGCA---TCATCGACATGGCGGCCGATCGCGGCGCCTACA 20696 | ||||| ||| || || ||| | | ||||||||||| || |||||||| |||| Sbjct 425499 TCTGGGAGATCA---AGCAGCGCACGCTGGTGGACATGGCGGCGGACCGCGGCGCGTACA 425443 Query 20697 TCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCT 20756 |||||||| ||||||| |||| || |||||| | || | | | | ||||| | || Sbjct 425442 TCGACCAGAGCCAGTCGTTCAACGTGTTCATGAGCGACCCCAACTTCGGCAAGCTCACCT 425383 Query 20757 CCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGAC 20814 | |||| | |||| |||| |||||| |||||||| ||||||||||| ||||| || Sbjct 425382 CGCTGCACTTTTACGCGTGGCGCAAGGGCCTCAAGACCGGCATGTACTACCTGCGCAC 425325 Score = 158 bits (174), Expect = 1e-33 Identities = 138/172 (80%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 19453 CAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCC 19512 ||||||||| ||||||| |||||||| ||||||||| |||||||||| ||| | ||||| Sbjct 428783 CAGGTACGTGGACCAGGGCGGCGGCAAGCGCAAGGGCGCGTTCGCCATGTACATTGAGCC 428724 Query 19513 ATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGAT 19572 |||||| | ||||| | || |||||||| |||||| |||||| || | |||||| Sbjct 428723 CTGGCACTCTGACGTGTTTGACTTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGC 428664 Query 19573 GCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAG 19624 |||| |||||||||||| || ||||||| || ||||||||||||||| Sbjct 428663 GCGCGCGCGCGACCTCTTCTACGCGCTGTGGATCCCCGACCTATTCATGGAG 428612 Score = 149 bits (164), Expect = 7e-31 Identities = 135/170 (79%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 79380 CTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTC 79439 ||||||||| ||||| ||||||||||| || |||||||||||| ||| |||||| Sbjct 428612 CTCCATGAATAGGTCGGGGATCCACAGCGCGTAGAAGAGGTCGCGCGCGCGCGCCTCCTC 428671 Query 79440 GTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAG 79499 | ||| |||||| ||||| ||||| ||||| | | ||| | |||||| ||||| | Sbjct 428672 CTTGCCGTGGTTCTTGCGCAGGTCGAGGAAGTCAAACACGTCAGAGTGCCAGGGCTCAAT 428731 Query 79500 ATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACC 79549 || |||||||||| ||||||||||||||||||||||||| ||||||| Sbjct 428732 GTACATGGCGAACGCGCCCTTGCGCTTGCCGCCGCCCTGGTCCACGTACC 428781 Score = 132 bits (146), Expect = 5e-26 Identities = 145/190 (76%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 79544 CGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGT 79603 |||||| ||| |||| |||||| || || |||||||| | |||||||| || | ||||| Sbjct 429021 CGTACCTGGCGGTGTCGTTGAAGACGCGCAGCATGGGGATGATGCCGTTGGAGGTGCCGT 429080 Query 79604 TCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGG-ATTCCGATGCCC 79662 | || ||| ||| | || | || || ||||| | |||| | | |||||||| Sbjct 429081 TGGTGCCGCGGATGTACGAGCCCGTGGCGCGGATGTT-GTGCAGGGACAGGCCGATGCCG 429139 Query 79663 CCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAG 79722 || | |||||||||||| ||||||||||||||||| ||||||||||| ||||||||| Sbjct 429140 CCAGCGCACTTGGAGATGACGGCGCACTCCTTGAGCGTGTCGTAGATGCCGTCGATCGAG 429199 Query 79723 TCGTCCTTCA 79732 |||| || || Sbjct 429200 TCGTTCTGCA 429209 Score = 131 bits (144), Expect = 2e-25 Identities = 248/360 (69%), Gaps = 10/360 (3%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||| ||||||||||| |||||||| ||||| ||| |||| | ||||| Sbjct 425325 GTGCGCAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCACGCGTAAAAGTGCAGCGAG 425384 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTC-CATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 | |||||| | | | | ||| || | |||||| | ||||| ||||||| ||||||||| Sbjct 425385 GTGAGCTTGCCGA-AGTTGGGGTCGCTCATGAACACGTTGAACGACTGGCTCTGGTCGAT 425443 Query 78309 GTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGT 78368 |||||| |||||||| ||||||||||| | | || ||| |||||||||| || Sbjct 425444 GTACGCGCCGCGGTCCGCCGCCATGTCCACCAGCGTGCGCTGCTTGATCTCCCAGACCGT 425503 Query 78369 CCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTACGCTCCCACCGGCTCG 78428 | ||| | ||||| || | || ||||||||||| | || ||||| || ||| Sbjct 425504 CTTGTAGAGCGCCTTTAGGTTGTCGGGGATGTCCAGCTCCTGCACGCTGCCGTTGGCCGC 425563 Query 78429 CACAATTTCATTCTTAATTTGAGGGTTCCA---GCGATTGATCTTCTGA-AGATCCCGGA 78484 ||| | || ||||| | | ||| |||| || || | || || || | | Sbjct 425564 CACCAGCTCGTTCTTGACGTTGGGGCTCCACACGCCCATGCGC----GAGAGGTCGTGCA 425619 Query 78485 CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGG 78544 ||||||| |||| | || |||||| ||| ||| ||||||| ||||||||||| Sbjct 425620 GCAGGTGCTGGTTCACCACTGTGAACTCCCCGCTCAGCACGCGGCGCACGTAGATGTTGG 425679 Score = 98.7 bits (108), Expect = 1e-15 Identities = 129/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 19286 ATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGT 19345 || || ||||||||||| ||||||||||||||||| |||||||||||| | || || Sbjct 429195 ATCGACGGCATCTACGACACGCTCAAGGAGTGCGCCGTCATCTCCAAGTGCGCTGGCGGC 429136 Query 19346 ATCGGGAT-CCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGG 19404 ||||| | | |||| | || ||||| | | || | ||| || || ||||| Sbjct 429135 ATCGGCCTGTCCCTGCAC-AACATCCGCGCCACGGGCTCGTACATCCGCGGCACCAACGG 429077 Query 19405 AGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACG 19460 || |||| ||| |||| ||||| |||||||||||| |||| |||||||||| Sbjct 429076 CACCTCCAACGGCATCATCCCCATGCTGCGCGTCTTCAACGACACCGCCAGGTACG 429021 Score = 93.3 bits (102), Expect = 5e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 19793 CAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAAT 19852 ||||| |||||||||| || | |||| |||||||||| ||| ||| |||||| || Sbjct 427900 CAGGTGGAGACCGGCAACCCCTTCATGCTCTACAAGGACAGCGCCAACCGCAAGTCCAAC 427841 Query 19853 CAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAG 19906 ||| ||||| | ||| | ||||||| ||||||||||| || || ||||| ||| Sbjct 427840 CAGCAGAACCTGGGCACCATCAAGTGCTCCAACCTGTGCACAGAGATCATCGAG 427787 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 79098 CTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCT 79157 ||||||||| |||||||||| || || ||||||||||||| | ||||| ||||||| Sbjct 427787 CTCGATGATCTCTGTGCACAGGTTGGAGCACTTGATGGTGCCCAGGTTCTGCTGGTTGGA 427846 Query 79158 CTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTG 79211 ||| ||| | |||||||||| |||| | || | |||||||| ||||| Sbjct 427847 CTTGCGGTTGGCGCTGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCCACCTG 427900 Score = 82.4 bits (90), Expect = 8e-11 Identities = 76/94 (81%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 20366 CACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATC 20425 ||||| | ||||||||| |||| || ||||||||||| |||||| ||| ||||||| Sbjct 426140 CACGGTGTGCGCAACTCGCTGCTGGTGGCGCCCATGCCTACCGCCAGCACCAGCCAGATC 426081 Query 20426 ATGGGGAACAACGAG-GCTTTCGAGCCGTACACG 20458 | || ||||||||| ||||| ||||| |||||| Sbjct 426080 CTCGGCAACAACGAGTGCTTT-GAGCCATACACG 426048 >seq1341 Length=23566 Score = 105 bits (116), Expect = 7e-18 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 || || || ||||||||| ||||||||||| | || ||||||||||| ||||| ||| Sbjct 13921 GTTGAGGGCATCTTCTTCAGCGGCTCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGC 13862 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 |||||||| || || | |||||||||||||| || || || ||||||||| Sbjct 13861 CTCATGCCCGGGCTTACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGC 13811 >seq5 Length=471533 Score = 100 bits (110), Expect = 3e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 49555 AATGGCCGGTGGACTTATGCAGCTCGTTGCTTATGGCGCTCAGGATGTGTATCTGACTGG 49614 ||||| |||||| ||||||||||| || || |||||||| ||||| | || ||| | || Sbjct 216768 AATGGGCGGTGGCCTTATGCAGCTGGTCGCCTATGGCGCGCAGGACATTTACCTGTCCGG 216827 Query 49615 TCAGCCGAAGGTGACCTTCTTCCAGGCCGTGTACAAGCGCCACACCAACTTTGCGATGGA 49674 | ||| || | ||||| ||| ||| || ||| ||||| |||||||| | ||||| Sbjct 216828 CAACCCGCAGATCACCTTTTTCAAGGTGGTCTACCGCCGCCATACCAACTTCACCATGGA 216887 Query 49675 GAACATCCAGCAGACGGTGAACGGC 49699 | |||| |||||||| | || ||| Sbjct 216888 GTCCATCGAGCAGACGTTCAATGGC 216912 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 48035 GGTGGCGGTCTTATGCAGCTCGTCGCTTATGGCGCCCAAGACGCGTACCTGACGGGTCAG 48094 || || || ||||||||||| ||||| |||||||| || ||| |||||| | || | Sbjct 216772 GGCGGTGGCCTTATGCAGCTGGTCGCCTATGGCGCGCAGGACATTTACCTGTCCGGCAAC 216831 Query 48095 CCCAAGGTGACCTTCTTCCAGTCGGTCTACAAGCGCCACACTAACTTCGCCATGGAGACT 48154 || || | ||||| ||| || ||||||| ||||| || |||||| |||||||| | Sbjct 216832 CCGCAGATCACCTTTTTCAAGGTGGTCTACCGCCGCCATACCAACTTCACCATGGAGTCC 216891 Query 48155 TCCCAGCAGAC 48165 | ||||||| Sbjct 216892 ATCGAGCAGAC 216902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548496674390880