Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq879 170 2e-37 seq12 167 3e-36 seq135 136 5e-27 seq282 111 2e-19 seq5 104 3e-17 seq83 100 3e-16 seq2 96.9 4e-15 >seq879 Length=48288 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || |||||||| || ||||||||||||||||| | Sbjct 2508 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACTCTTGAGGTTGAGTCTTCT 2567 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| || || |||||||||||||| ||||| || |||||| Sbjct 2568 GACACCATCGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 2627 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||| || || ||||| || ||||||| || || || || ||||| || Sbjct 2628 CAGCGTCTGATTTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGGCCGACTACAAC 2687 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || |||| || || ||||| Sbjct 2688 ATCCAGAAGGAGTCTACCCTGCACCTGGTGCTGCGCCTGCGTGGTGG 2734 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||||| || ||||| || || ||||||||||||||||| | Sbjct 3808 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAAACCATCACTCTTGAGGTTGAGTCTTCT 3867 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| || || |||||||||||||| ||||| || |||||| Sbjct 3868 GACACCATCGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 3927 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || ||||||| || ||||| || ||||| || Sbjct 3928 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTGGCTGACTACAAC 3987 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || || || |||| || ||||| || Sbjct 3988 ATTCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGCCTGCGCGGCGG 4034 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||||| ||||||||||| || ||||||||||| ||||| | Sbjct 4036 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCT 4095 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | || ||||| || ||||||||||||||||| Sbjct 4096 GACACCATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGG 4139 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || || || || ||||||||||| || |||||||| || ||||| || ||||||| || Sbjct 3152 GGCATCCCACCGGACCAGCAGCGCCTGATTTTTGCGGGCAAGCAGCTGGAGGATGGCCGC 3211 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 ||||| || ||||| || |||| ||||| || || || || || || |||| || ||| Sbjct 3212 ACCCTGGCTGACTACAACATCCAGAAGGAGTCTACCCTGCACCTGGTGCTGCGCCTGCGC 3271 Query 27628 GGTGG 27632 ||||| Sbjct 3272 GGTGG 3276 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || || || || ||||||||||| || |||||||| || ||||| || ||||||| || Sbjct 3682 GGCATCCCACCGGACCAGCAGCGCCTGATTTTTGCGGGCAAGCAGCTGGAGGATGGCCGC 3741 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 ||||| || ||||| || |||| ||||| || || || || || || |||| || ||| Sbjct 3742 ACCCTGGCTGACTACAACATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGCCTGCGC 3801 Query 27628 GGTGG 27632 ||||| Sbjct 3802 GGTGG 3806 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||||| || |||||||| ||||| |||||||| ||||| | Sbjct 3278 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATTACCCTTGAGGTCGAGTCCTCT 3337 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | || ||||| || ||||||||||||||||| Sbjct 3338 GACACCATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGG 3381 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || ||||| || |||||||||||||| || || || || ||||| || ||||||| || Sbjct 2382 GGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGC 2441 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 || || || ||||| || |||| ||||| || || || || || || |||| || ||| Sbjct 2442 ACGCTGGCCGACTACAACATCCAGAAGGAGTCTACCCTGCACCTGGTGCTGCGCCTGCGC 2501 Query 27628 GGTGG 27632 ||||| Sbjct 2502 GGTGG 2506 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || |||||||| || || |||||||| ||||| | Sbjct 2736 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCT 2795 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | || ||||| || ||||||||||||||||| Sbjct 2796 GACACCATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGG 2839 >seq12 Length=425388 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| || || |||||||| || || |||||||||||||| | Sbjct 400612 ATGCAGATTTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCGTCT 400553 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| || || |||||||||||||| || || || |||||| Sbjct 400552 GACACCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAG 400493 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| || ||||||| || || || || ||||| || Sbjct 400492 CAGCGCCTCATCTTTGCGGGCAAGCAGCTGGAGGATGGCCGCACGCTGGCTGACTACAAC 400433 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || | || ||||||| ||||| || Sbjct 400432 ATCCAGAAGGAGTCCACGCTGCACTTGGTGCTGCGTCTGCGCGGCGG 400386 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || |||||||| || || |||||||| ||||| | Sbjct 401296 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACGCTTGAGGTCGAGTCGTCT 401237 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| || || |||||||||||||| ||||| ||||||||| Sbjct 401236 GACACCATCGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 401177 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| || ||||||| || || || || || || || Sbjct 401176 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGGCTGATTACAAC 401117 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || | || ||||||| |||||||| Sbjct 401116 ATCCAGAAGGAGTCCACGCTGCACTTGGTGCTGCGTCTGCGCGGTGG 401070 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || |||||||| || || |||||||| ||||| | Sbjct 401992 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACGCTTGAGGTCGAGTCGTCT 401933 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| || || |||||||||||||| || || || |||||| Sbjct 401932 GACACCATCGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAG 401873 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| || ||||||| || || || || ||||| || Sbjct 401872 CAGCGCCTCATCTTTGCGGGCAAGCAGCTGGAGGATGGCCGCACACTGGCTGACTACAAC 401813 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || | || ||||||| ||||| || Sbjct 401812 ATCCAGAAGGAGTCCACGCTGCACTTGGTGCTGCGTCTGCGCGGCGG 401766 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || |||||||| || || |||||||| ||||| | Sbjct 400840 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCGTCT 400781 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| || || |||||||||||||| || || || |||||| Sbjct 400780 GACACCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAG 400721 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| || ||||||| || || || || ||||| || Sbjct 400720 CAGCGCCTCATCTTTGCGGGCAAGCAGCTGGAGGATGGCCGCACGCTGGCTGACTACAAC 400661 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || | || ||||||| ||||| || Sbjct 400660 ATCCAGAAGGAGTCCACGCTGCACTTGGTGCTGCGTCTGCGCGGCGG 400614 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| || || |||||||| || || |||||||| ||||| | Sbjct 401068 ATGCAGATTTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCGTCT 401009 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| || || || ||||||||||| || || || |||||| Sbjct 401008 GACACCATTGACAACGTCAAGCAGAAGATCCAAGACAAGGAGGGTATCCCCCCCGACCAG 400949 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || ||||| || ||||||| || || || || ||||| || Sbjct 400948 CAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGGCTGACTACAAC 400889 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || | || ||||||| ||||| || Sbjct 400888 ATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTGCGCGGCGG 400842 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || || || |||||||||||||| || || ||||| || ||||| || ||||||| || Sbjct 401422 GGCATCCCCCCAGACCAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGC 401363 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 || || || ||||| || |||| ||||| ||||| || || | || ||||||| ||| Sbjct 401362 ACGCTGGCTGACTACAACATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGC 401303 Query 27628 GGTGG 27632 || || Sbjct 401302 GGCGG 401298 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || ||||| |||||||||||||| || || || || || ||||| || ||||||| || Sbjct 402118 GGCATTCCCCCAGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGC 402059 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 || || || ||||| || |||| ||||| ||||| || || | || ||||||| ||| Sbjct 402058 ACGCTGGCTGACTACAACATCCAGAAGGAGTCCACGCTGCACTTGGTGCTGCGTCTGCGC 401999 Query 27628 GGTGG 27632 || || Sbjct 401998 GGCGG 401994 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || || |||||||| ||||| | Sbjct 401764 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCT 401705 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||||| ||| | ||| || || |||||||||||||| Sbjct 401704 GACACCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGG 401661 Score = 82.4 bits (90), Expect = 9e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || || || |||||||||||||| || || ||||| || ||||| || ||||||| || Sbjct 402646 GGTATCCCCCCAGACCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGC 402587 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 || | || ||||| || |||| ||||| || || || || || || |||| || || Sbjct 402586 ACGTTGGCTGACTACAACATCCAGAAGGAGTCTACCCTGCACCTCGTGCTGCGCCTGCGT 402527 Query 27628 GGTGG 27632 ||||| Sbjct 402526 GGTGG 402522 >seq135 Length=196152 Score = 136 bits (150), Expect = 5e-27 Identities = 277/406 (68%), Gaps = 4/406 (1%) Strand=Plus/Minus Query 81169 TCAGTGAGGTCTGGGCACTCGTTAGGGC-ACATCAGGTGCCAGTCGGTGTCGTTCTCTAC 81227 ||||||||| ||||||| || | |||| |||| ||| |||||| ||||| | || Sbjct 154481 TCAGTGAGGCCTGGGCAG-CGGTCGGGCGACATGAGGAACCAGTCCTCGTCGTCATGCAC 154423 Query 81228 AGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTC 81287 |||||| |||| || | ||| || || ||| |||||||| ||| || Sbjct 154422 GCGGCGCATGAACTCGTCGGGCACCCACAGTGCCAGGAAGAGGTCGCGCGTCCGCTCCGT 154363 Query 81288 CTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTC 81347 ||| | || ||| | || ||||| | ||| ||| | ||| || ||||||||||| Sbjct 154362 CTCGGCGCCTGTGTTCTGTCGTAACTCCACAAACTCCCACACGTCGGCGTGCCATGGCTC 154303 Query 81348 CAGATACACGGCGATCGACCCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGC 81407 || ||||| |||||||| |||||||| ||| |||||| || || || ||| | Sbjct 154302 CAAGTACACCGCGATCGAGCCCTTGCGCTTGCCCGATTGGTTGCAATACCGTGCGGTCTC 154243 Query 81408 GTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACG 81467 ||| || || | ||| || | ||| || || ||| | ||||| || | || ||| || Sbjct 154242 GTTGAACACCTTGAGCATGGGCACGATGCCGTCGGACCGGCCGTTGGTGCTCATGATGCG 154183 Query 81468 CGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAAT 81527 ||| |||||||| || | ||||||| | ||||||||| || | |||||| || || Sbjct 154182 CGAGCCCTTGGCACGGATGTTGCTGACGTGCACACCGATGCCGCCAGCCCACTTGGAGAT 154123 Query 81528 CTGAGCAC-ACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATC 81572 | |||| ||| | ||||| | | || || |||||||| || Sbjct 154122 GCGCGCACTGTCGGAT-ATGGTTTTGAAGATACCATCGATGCTGTC 154078 Score = 125 bits (138), Expect = 8e-24 Identities = 288/426 (68%), Gaps = 11/426 (3%) Strand=Plus/Minus Query 54441 GCGCCGGAGCACCGACCCTGAATTGTCCTTCCAGTTTGGCACCTCGTTACCTGCAAGGAT 54500 |||||| |||||| || | ||||| |||||||||| ||||||| ||||| || | Sbjct 39448 GCGCCGCGACACCGAGCCAGCGTTGTCTACCCAGTTTGGCGCCTCGTTGCCTGCCAGCAC 39389 Query 54501 ACCTGGCGTCTTCCACT---GAAGGCTCTTGGCGCTCTTGAACTTGCGCGCAATGCT--C 54555 || ||| |||||| | || ||| ||| ||||| ||||| || || | Sbjct 39388 CCCAGGCACCTTCCAGCATGGCAGCGTCTCGGCCTTCTTGTACTTGATGTTGAT-CTGGC 39330 Query 54556 AGGTCCTCACCGGACACCAGCGACTGGAACTCAGCCTGCTCGAGCTGCAAATCCCCCTTG 54615 | | |||| || ||||| | ||||||||| || ||||| | ||||| ||||||||| Sbjct 39329 ATG-CCTCTCCTGACACGACGCTCTGGAACTCGGCTTGCTCCATCTGCAGGTCCCCCTTG 39271 Query 54616 ACCTCGGGGCTGATGAACATGAAACCTTCA-TG-GATGGAATCCAGACCGAACTTCTTCT 54673 | || ||| || ||||| || |||| || ||| | ||| |||||||| || Sbjct 39270 ATTTCTGGGGCGACGAACAGGAG--CTTCTCTGCGATCGCCGACAGGCCGAACTTGCGCT 39213 Query 54674 CGATGTTGTTCGAAAGCGTCTTGACGTCCTCGGTCTCGTAGAACTTCTTGCAAACCTTTG 54733 |||||||||| || || ||||| |||| |||| | || || || || Sbjct 39212 CGATGTTGTTAGAGAGGACACCCACGTCTTCGGGCTCGAAAAAGTTGGCACAGACGCGCA 39153 Query 54734 TGATGATGGTTGACTTGCCACTGCGAGCAATGCCCTTGAGGAAGGGGATCACCTGCCAGC 54793 ||| || || |||||||| ||| || ||| |||| ||| ||||| |||||||| Sbjct 39152 TGAGGAGCGTCGACTTGCCCGTGCCGGCGTGGCCTTTGAAGAAAGGGATGACCTGCCATG 39093 Query 54794 CGTCCAAATCATTCACGTCAAAGCACAGACGGCCGCAGAATACGTACATCCAACGGCACA 54853 | ||| || || ||| | |||| ||||| ||| ||||||| ||| ||||| | Sbjct 39092 CATCCTTGTCTCCGACCTCATACAACAGGCGGCCAACGAAGACGTACAGCCATCGGCAGA 39033 Query 54854 CGTCGG 54859 |||||| Sbjct 39032 CGTCGG 39027 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 137954 GTTCCAGCGGCGCATGATGATTGCG-GCGGTTACGGGGCTTGAGTTCCTGAATGAGAAGT 138012 |||||| || |||||| | || || ||| |||| | |||||| |||| | | Sbjct 137345 GTTCCAACGCCGCATGCTCATGGCATGCGTGCACGGCA-TCGAGTTCTTGAACGGCCGCT 137403 Query 138013 TCGATCCGTTCGATATTGAGCTGAATGGCTGGTCCCAGAACACCATGGAGAATATCGATG 138072 |||| || || || | ||||| | |||||||| | | || | ||||| | || | Sbjct 137404 TCGACCCTTTTGACGTCAAGCTGGACGGCTGGTCGGACAGCATCCACGAGAACCTGGACG 137463 Query 138073 ACTACGACGGTGTGTTCGAGGAGCTGTACAACAAGTACAAGACCAAGGTGGCGATGGCAC 138132 ||||||||| ||||||||||||||| | ||||||| ||| | |||||| | Sbjct 137464 ACTACGACGACGTGTTCGAGGAGCTGCATGTCAAGTACCGCGGCAAAGCCAAGATGGCGC 137523 Query 138133 CAGAGGTGAAGCTGCTTTTCATGGTCGGCGGCTCTGCAATGATGTTCCAT 138182 | ||| ||||||| || |||||||| |||||||| ||| ||||||||||| Sbjct 137524 CCGAGCTGAAGCTCCTCTTCATGGTGGGCGGCTCCGCAGTGATGTTCCAT 137573 >seq282 Length=131332 Score = 111 bits (122), Expect = 2e-19 Identities = 141/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 31958 TCAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATAT 32017 || |||| ||||| || |||| ||||||||||||||| ||||||||| | | | Sbjct 51995 TCGAGCGCTCCATCCCCAGCGTGATGGACGGCCTCAAGCCGGGTCAGCGCAAGATCCTGT 51936 Query 32018 ACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACG 32077 |||||| | ||||| ||||| || ||||| ||||| ||||||||| | | |||| Sbjct 51935 ACGCCTCCTTCAAGCGCAACCTCAAGAAGGACATCAAGGTCGCGCAGCTGGCCGCGTACG 51876 Query 32078 TGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCT---CCAGGGCACCATTGTCA 32134 || | ||||| ||||||| ||||||||||| || ||| ||| |||||| |||| Sbjct 51875 TGTCGGAGCACTCGGCCTACCACCACGGCGA-GCAGAGCTTGGCCA--CCACCATCGTCA 51819 Query 32135 ACCTTGCTCAG 32145 |||| || ||| Sbjct 51818 ACCTGGCACAG 51808 >seq5 Length=471533 Score = 104 bits (114), Expect = 3e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 56278 AATGGCCGGTGGACTTATGCAGCTCGTTGCTTATGGCGCTCAGGATGTGTACCTGACTGG 56337 ||||| |||||| ||||||||||| || || |||||||| ||||| | |||||| | || Sbjct 216768 AATGGGCGGTGGCCTTATGCAGCTGGTCGCCTATGGCGCGCAGGACATTTACCTGTCCGG 216827 Query 56338 GCAGCCCAAGGTTACCTTCTTCCAGGCGGTGTACAAGCGTCACACCAACTTCGCGATGGA 56397 | || || | ||||| ||| ||| ||| ||| || || ||||||||| | ||||| Sbjct 216828 CAACCCGCAGATCACCTTTTTCAAGGTGGTCTACCGCCGCCATACCAACTTCACCATGGA 216887 Query 56398 GAACATCCAGCAGACGGTGAACGGC 56422 | |||| |||||||| | || ||| Sbjct 216888 GTCCATCGAGCAGACGTTCAATGGC 216912 Score = 91.5 bits (100), Expect = 2e-13 Identities = 263/396 (66%), Gaps = 14/396 (4%) Strand=Plus/Plus Query 31168 AAAACAGATGGGTCCAA--AAAGTCTCGAATTACGGGAATTCCGAAGCTCGACGACGCCA 31225 ||||| ||||| ||| |||| | ||| | || || ||||| ||||| ||||| |||| Sbjct 300302 AAAACGGATGGACGCAAGCAAAG-CACGA-TCACCGGCATTCCCAAGCTGGACGATGCCA 300359 Query 31226 ACTGGGCCGGTACCCACAAGTCGCA-CGA---GTGCACGCTTATTATTACCGAGGGTGAC 31281 |||||||||| |||| |||| | | ||||| ||||| | |||||||| ||| Sbjct 300360 ACTGGGCCGG----CACAGCGCGCAGCCAACTCTGCACCCTTATCCTCACCGAGGGCGAC 300415 Query 31282 TCGGCAAAGGCGCTTGCTATTGCTGGCTTGAGTGTTGTGGGGCGCAATGCGTTCGGGGTG 31341 || |||||| | | || || |||| || ||||| ||| | | |||||| ||| Sbjct 300416 TCCGCAAAGTCCATGGCGATCTCTGGGCTGGACCAGGTGGGACGCGACGTGTTCGGCGTG 300475 Query 31342 TTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGACGCCTCCGTTAAACAGGTTACGGAT 31401 || ||||| || ||||| ||||| ||| || || | | | |||| Sbjct 300476 TTCCCGCTGCGTGGCAAAATCATGAACGTGTGTGGCGAGAGCGCAGAGTCGATCGCGGAC 300535 Query 31402 AATGAAGAGTTTTCCAACCTGAAAAAGATCCTCGGGCTTCAGCATGGCAAGGTATATA-A 31460 || | ||| || | | || || ||| | ||||| || ||| ||| || | Sbjct 300536 AACAAGGAGATTGCGGATCTCAAGCGCATCATGGGGCTGGAGTCGGGCCGGGTGTACACC 300595 Query 31461 TTCACTGAGAGAATTGCGGTACGGTCGCCTCATGATTATGACCGACGCAGATCTCGACGG 31520 | | | | | || |||| ||||| ||| ||||||| |||||||| || || ||||| Sbjct 300596 TCCGCCGCG-GACCTGCGCTACGGGCGCATCATGATCATGACCGATGCCGACGCAGACGG 300654 Query 31521 CAGTCACATCAAGGGTCTTGTCCTAAATATGTTCCA 31556 ||| |||||||| || || || | || ||||||| Sbjct 300655 CAGCCACATCAAAGGCCTGGTGATGAACCTGTTCCA 300690 >seq83 Length=234864 Score = 100 bits (110), Expect = 3e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || ||||| ||||||||||||||||| || ||||| || ||||| || ||||||| || Sbjct 63222 GGCATTCCCCCAGACCAGCAGCGTCTCATCTTTGCAGGCAAGCAGCTGGAGGATGGCCGC 63281 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 ||||| || ||||| || | || ||||| || || || || || || |||| || ||| Sbjct 63282 ACCCTGGCTGACTACAACATTCAGAAGGAGTCAACACTGCACCTGGTGCTGCGCCTGCGC 63341 Query 27628 GGTGG 27632 ||||| Sbjct 63342 GGTGG 63346 >seq2 Length=533353 Score = 96.9 bits (106), Expect = 4e-15 Identities = 123/169 (73%), Gaps = 3/169 (2%) Strand=Plus/Plus Query 81230 CCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCT 81289 ||| |||||| ||| |||||||| || ||| ||| |||||||| ||||||||||| Sbjct 428611 CCTCCATGAATAGGTCGGGGATCCACAGCGCGTAGAAGAGGTCGCGCGCGCGCGCCTCCT 428670 Query 81290 CATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCA 81349 | | || ||||| ||||| ||||| ||||| | | ||| | ||||| ||||| | Sbjct 428671 CCTTGCCGTGGTTCTTGCGCAGGTCGAGGAAGTCAAACACGTCAGAGTGCCAGGGCTCAA 428730 Query 81350 GATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTA 81395 |||| ||||| || |||||||| | ||| ||||||| ||||| Sbjct 428731 TGTACATGGCGAACGCGCCCTTGCGCTTGCCGCCGCCCTGGTCCACGTA 428779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570281157334240