Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq269 131 6e-26 >seq269 Length=134069 Score = 131 bits (144), Expect = 6e-26 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 54999 GCTGTGACCCGTGATCAGGTGACTGCGATGCAGGCCCTGGAACTGTGGTTACTGTATCAA 55058 || ||||| ||||| | |||| ||| ||||| ||||| |||||| | || || || Sbjct 77479 GCGGTGACGCGTGACGACGTGAGCGCGCTGCAGCAGCTGGAGCTGTGGCTGCTCTACCAG 77538 Query 55059 CGTGAGTGGTGTGAGCACAAGCCTTCCGTCACTGTCACCGTGCGTGACGAGGAATGGCTG 55118 || | ||||| ||||||||||| ||| |||| ||||| ||||| || | || ||| || Sbjct 77539 CGCCACTGGTGCGAGCACAAGCCCTCCATCACCGTCACGGTGCGCGAGCACGAGTGGATG 77598 Query 55119 TCGGTGGGCGCCTGGGTCTATGAGCACTTCGACGAGGTGTCGGGCATCAGCTTCCTTCCG 55178 |||||||||||||| || ||||| |||||| |||||||| | |||||||| ||| Sbjct 77599 GACGTGGGCGCCTGGGTGTACCGCCACTTTGACGAGATGTCGGGCGTGAGCTTCCTGCCG 77658 Query 55179 CATACCGATCACACCTATCAGCAGG 55203 | | ||| || ||| |||||| Sbjct 77659 TACAGCGACTTCAGCTACAAGCAGG 77683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187280476889472