Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20debaryana_20[genbank_20GCA_5F001662405.1_202016-04- 26] 10,139 sequences; 120,364,444 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq4684 132 3e-26 >seq4684 Length=5897 Score = 132 bits (146), Expect = 3e-26 Identities = 119/144 (83%), Gaps = 4/144 (3%) Strand=Plus/Minus Query 33575 AGATGGGCGACAAGTTTGCATCGTT-CACGGCCCAGAAGGGCACGTGCGGCATGATGTAC 33633 || ||||||||||||| || ||| ||||||| ||||||||||||||||||| | |||| Sbjct 1369 AGGTGGGCGACAAGTTCGCCTCGCGGCACGGCC-AGAAGGGCACGTGCGGCATCACGTAC 1311 Query 33634 GACCAGTG-GGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCC 33692 |||| | ||||||||| ||||||||||| ||| | || |||||| | || ||||||| Sbjct 1310 -ACCATGGAGGACATGCCCTTCACGGCCGAGGGCATCGTGCCGGACATCATCGTCAACCC 1252 Query 33693 GCATGCGTTCCCCTCGCGCATGAC 33716 ||| || |||||||||||||||| Sbjct 1251 GCACGCCATCCCCTCGCGCATGAC 1228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356189580548017