Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20debaryana_20[genbank_20GCA_5F001662405.1_202016-04- 26] 10,139 sequences; 120,364,444 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1451 105 6e-18 >seq1451 Length=23028 Score = 105 bits (116), Expect = 6e-18 Identities = 105/134 (78%), Gaps = 4/134 (3%) Strand=Plus/Minus Query 5624 TCGAAATCGTTGTGGCCGAA--GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGG 5681 ||||| || |||| |||| |||||||||||||||||| || || ||||| ||||| Sbjct 15076 TCGAAGTCCTTGT--CCGAGTGGTTGAACAGCACCACGCCGACATTTCCGCGATAGTCCT 15019 Query 5682 CGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAG 5741 | || || |||||||| ||| ||||||||||| ||| || || ||||| ||||| || | Sbjct 15018 CATCGATGACGCCCGCACCCGTGTCGATGAAGTTCTTCACAGCGAGGCCAGAGCGAGGCG 14959 Query 5742 CCACGCGGCCGTAG 5755 | ||||| || ||| Sbjct 14958 CAACGCGACCATAG 14945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430001258580968