Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20debaryana_20[genbank_20GCA_5F001662405.1_202016-04- 26] 10,139 sequences; 120,364,444 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq2665 87.8 2e-12 >seq2665 Length=12956 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 152970 GGCACCGAGCATCTGCTGCTCGGGCTGGTCCACGAGGGCGAGGGCGTAGCCGCCAAGGCG 153029 ||||| ||||| |||||||| || || || |||| | ||| | |||||||||| | Sbjct 5484 GGCACGGAGCAGCTGCTGCTGGGTCTCATCGGCGAGTCCACCGGCATTGCCGCCAAGGTG 5543 Query 153030 CTGCAGGCGCTCGACATCAACCTGGAGGAGGTGCGTGCCGAGGTCGAGGAGATCATCGGC 153089 ||| || | | |||||||| |||| | || | ||||| ||| ||||||||||| Sbjct 5544 CTGAAGAGCATGGGTGTCAACCTGAAGGACGCCCGCGTGGAGGTGGAGAAGATCATCGGC 5603 Query 153090 CACGGCCAGCAGGCACC--CACCGGGCACATCCCGTTCACCGACCGCTCCAAGCGCGTCC 153147 | ||| | ||| | | | | | | || || ||||| |||| |||||||||| | Sbjct 5604 CGAGGC--TCGGGCTTCGTCGCGGTGGAAATTCCCTTCACGCCCCGCGCCAAGCGCGTGC 5661 Query 153148 TGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGG 153181 ||||| |||| ||| ||||| | ||||| || Sbjct 5662 TGGAGATGTCTCTGGAGGAGGCTCGCCAGCTGGG 5695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526531660235280