Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20debaryana_20[genbank_20GCA_5F001662405.1_202016-04- 26] 10,139 sequences; 120,364,444 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq611 87.8 6e-12 >seq611 Length=42128 Score = 87.8 bits (96), Expect = 6e-12 Identities = 92/120 (77%), Gaps = 1/120 (1%) Strand=Plus/Plus Query 443753 CAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTA 443812 |||||| || |||||||||||| |||| ||||| || |||| ||| ||| |||| Sbjct 15828 CAGCTTCTGC-TCCATCTTCTGGCTGAAGAAGCGCCTGCTCATGCCCGGCCTGTCCTTCT 15886 Query 443813 GTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 |||| || ||| ||| |||||||| |||| |||||||||||||| || ||||||| Sbjct 15887 CCAACGTGCTCATCTCTCGCGACGAGGGGCTGCACTGCGACTTCGCCTGCCTGCTCTACA 15946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588129665722855