Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1501 98.7 2e-15 >seq1501 Length=566706 Score = 98.7 bits (108), Expect = 2e-15 Identities = 117/158 (74%), Gaps = 3/158 (2%) Strand=Plus/Plus Query 249251 ACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCG 249307 |||||| ||| || || ||||| | |||||||| || |||| |||||||||| Sbjct 384224 ACCAGGGCGGCGGCAAGCGCAAGGGCGCCTTCGCCATCTACATGGAGCCCTGGCACGCCG 384283 Query 249308 ATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTG 249367 | | || || ||||||||| || |||||| ||||||| ||| | | || || | Sbjct 384284 ACGTGTTTGACTTCCTGGACCTGCGCAAGAACCACGGCAAGGAGGAGGCGCGCGCCCGCG 384343 Query 249368 ACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405 |||| ||||||||||||||| || ||||| |||||||| Sbjct 384344 ACCTGTTCTACGGCCTGTGGATCCCCGACCTGTTCATG 384381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073744965609344