Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1550 114 9e-21 >seq1550 Length=2811283 Score = 114 bits (126), Expect = 9e-21 Identities = 115/144 (80%), Gaps = 4/144 (3%) Strand=Plus/Minus Query 33575 AGATGGGCGACAAGTTTGCATCGTT-CACGGCCCAGAAGGGCACGTGCGGCATGATGTAC 33633 || ||||||||||||| || ||| ||||||| ||||||||||||||||||| | |||| Sbjct 316810 AGGTGGGCGACAAGTTCGCGTCGCGGCACGGCC-AGAAGGGCACGTGCGGCATCACGTAC 316752 Query 33634 GACCA-GTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCC 33692 |||| | ||||||||| ||||| ||||| ||| | || |||||| | || ||||||| Sbjct 316751 -ACCATGGAGGACATGCCCTTCACCGCCGAGGGCATCGTGCCGGACATCATCGTCAACCC 316693 Query 33693 GCATGCGTTCCCCTCGCGCATGAC 33716 ||| || ||||| |||||||| Sbjct 316692 GCACGCCATCCCCAGCCGCATGAC 316669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356226835791874