Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1501 89.7 5e-13 >seq1501 Length=566706 Score = 89.7 bits (98), Expect = 5e-13 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 152763 TAGTACATGCCCGTCTTGAGGCCACGTTGCCAGCCGTACATGTGCACCGACGCCATCTTA 152822 ||||||||||| ||||||||||| ||||| |||| | ||||| ||| | || ||| Sbjct 386080 TAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCAGCGAGGTCAGCTT- 386022 Query 152823 GCCAAAG-TAGGGTCGGCCATGTACACGTTAAACGATTGACTTTGATCAATAAATGCGCC 152881 ||||||| | ||||||| |||| ||||||| || || || || ||||| | ||||| Sbjct 386021 GCCAAAGTTGGGGTCGGGCATGAACACGTTGAAGCTCTGGCTCTGGTCAATGTAGGCGCC 385962 Query 152882 TCTATCTGCTGCCATGTC 152899 | || || |||||||| Sbjct 385961 GCGGTCGGCGGCCATGTC 385944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496054339153600